Difference between revisions of "TSS:Hg 105346.1"
From referenceTSS
| Line 7: | Line 7: | ||
|HMSNR= | |HMSNR= | ||
|HXK1= | |HXK1= | ||
| + | |all_trans=NM_001322366:190 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=190 |
|distance_to_tss=-196 | |distance_to_tss=-196 | ||
|end=69317991 | |end=69317991 | ||
| Line 15: | Line 16: | ||
|entrez_id=3098 | |entrez_id=3098 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| − | |gene_alias=HK | + | |gene_alias=HK{{!}}HK1-ta{{!}}HK1-tb{{!}}HK1-tc{{!}}HKD{{!}}HKI{{!}}HMSNR{{!}}HXK1{{!}}RP79{{!}}hexokinase |
|gene_description=hexokinase 1 | |gene_description=hexokinase 1 | ||
| − | |gene_name=HK1 | + | |gene_id=3098 |
| + | |gene_name=hexokinase 1 | ||
| + | |gene_source=HGNC:4922 | ||
| + | |gene_symbol=HK1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hexokinase= | |hexokinase= | ||
| + | |hgnc_mgi_id=HGNC:4922 | ||
|nearest_ensembl=ENSG00000156515 | |nearest_ensembl=ENSG00000156515 | ||
|nearest_promoter_id=NM_001322366 | |nearest_promoter_id=NM_001322366 | ||
|nearest_refseq=NM_000188 | |nearest_refseq=NM_000188 | ||
|nearest_unigene=Hs.370365 | |nearest_unigene=Hs.370365 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=69317979 | |start=69317979 | ||
|start_of_center_position=69317985 | |start_of_center_position=69317985 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001322366 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105346.1 | |tss_id=hg_105346.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:12, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 69317985 |
|---|---|
| End of the center position in the TSS region: | 69317986 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001322366 |
|---|---|
| Distance: | 190 |
| Num_trans: | 1 |
| All_trans: | NM_001322366:190 |
TATA-Box annotation
| Distance to TSS: | -196 |
|---|---|
| Nearest PromoterID: | NM_001322366 |
| Entrez ID: | 3098 |
| Nearest Unigene: | Hs.370365 |
| Nearest Refseq: | NM_000188 |
| Nearest Ensembl: | ENSG00000156515 |
| Gene Name: | hexokinase 1 |
| Gene Alias: | HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|RP79|hexokinase |
| Gene Description: | hexokinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
