Difference between revisions of "TSS:Hg 10535.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|JFK= | |JFK= | ||
| − | |all_trans=ENST00000375592. | + | |all_trans=ENST00000375592.8:0 NM_018994:0 BC063864:0 BC043410:0 AK055598:0 AK310671:0 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=23 |
|end=16352494 | |end=16352494 | ||
|end_of_center_position=16352457 | |end_of_center_position=16352457 | ||
|entrez_id=54455 | |entrez_id=54455 | ||
|gc_percent=0.771144 | |gc_percent=0.771144 | ||
| − | |gene_alias=Fbx42 | + | |gene_alias=Fbx42{{!}}JFK |
|gene_description=F-box protein 42 | |gene_description=F-box protein 42 | ||
|gene_id=54455 | |gene_id=54455 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_018994 | |nearest_refseq=NM_018994 | ||
|nearest_unigene=Hs.522384 | |nearest_unigene=Hs.522384 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=16352419 | |start=16352419 | ||
|start_of_center_position=16352456 | |start_of_center_position=16352456 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000375592. | + | |transcript_name=ENST00000375592.8 NM_018994 BC063864 BC043410 AK055598 AK310671 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10535.1 | |tss_id=hg_10535.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q6P3S6 |
}} | }} | ||
Revision as of 18:12, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 16352456 |
|---|---|
| End of the center position in the TSS region: | 16352457 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000375592.8 NM_018994 BC063864 BC043410 AK055598 AK310671 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000375592.8:0 NM_018994:0 BC063864:0 BC043410:0 AK055598:0 AK310671:0 |
TATA-Box annotation
| Distance to TSS: | 23 |
|---|---|
| Nearest PromoterID: | NM_018994 |
| Entrez ID: | 54455 |
| Nearest Unigene: | Hs.522384 |
| Nearest Refseq: | NM_018994 |
| Nearest Ensembl: | ENSG00000037637 |
| Gene Name: | F-box protein 42 |
| Gene Alias: | Fbx42|JFK |
| Gene Description: | F-box protein 42 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
