Difference between revisions of "TSS:Hg 105351.1"
From referenceTSS
| Line 3: | Line 3: | ||
|NET7= | |NET7= | ||
|TM4SF15= | |TM4SF15= | ||
| − | |all_trans=ENST00000373290. | + | |all_trans=ENST00000373290.7:0 ENST00000478112.1:0 NM_012339:0 NM_001351263:0 NR_147091:0 BC003157:0 BC004161:0 AF120266:0 AY358934:0 LF208769:-18 MA444346:-18 CU678410:63 AB529132:63 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=27 |
|end=69451532 | |end=69451532 | ||
|end_of_center_position=69451495 | |end_of_center_position=69451495 | ||
|entrez_id=23555 | |entrez_id=23555 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
| − | |gene_alias=2700063A19Rik | + | |gene_alias=2700063A19Rik{{!}}NET-7{{!}}NET7{{!}}TM4SF15 |
|gene_description=tetraspanin 15 | |gene_description=tetraspanin 15 | ||
|gene_id=23555 | |gene_id=23555 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=HGNC:23298 | |hgnc_mgi_id=HGNC:23298 | ||
|nearest_ensembl=ENSG00000099282 | |nearest_ensembl=ENSG00000099282 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001351263 |
|nearest_refseq=NM_012339 | |nearest_refseq=NM_012339 | ||
|nearest_unigene=Hs.499941 | |nearest_unigene=Hs.499941 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=69451456 | |start=69451456 | ||
|start_of_center_position=69451494 | |start_of_center_position=69451494 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000373290. | + | |transcript_name=ENST00000373290.7 ENST00000478112.1 NM_012339 NM_001351263 NR_147091 BC003157 BC004161 AF120266 AY358934 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105351.1 | |tss_id=hg_105351.1 | ||
Revision as of 18:12, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 69451494 |
|---|---|
| End of the center position in the TSS region: | 69451495 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000373290.7 ENST00000478112.1 NM_012339 NM_001351263 NR_147091 BC003157 BC004161 AF120266 AY358934 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000373290.7:0 ENST00000478112.1:0 NM_012339:0 NM_001351263:0 NR_147091:0 BC003157:0 BC004161:0 AF120266:0 AY358934:0 LF208769:-18 MA444346:-18 CU678410:63 AB529132:63 |
TATA-Box annotation
| Distance to TSS: | 27 |
|---|---|
| Nearest PromoterID: | NM_001351263 |
| Entrez ID: | 23555 |
| Nearest Unigene: | Hs.499941 |
| Nearest Refseq: | NM_012339 |
| Nearest Ensembl: | ENSG00000099282 |
| Gene Name: | tetraspanin 15 |
| Gene Alias: | 2700063A19Rik|NET-7|NET7|TM4SF15 |
| Gene Description: | tetraspanin 15 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
