Difference between revisions of "TSS:Hg 105381.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|PHASII= | |PHASII= | ||
| − | |all_trans=AK313724:0 BC050633:3 | + | |all_trans=ENST00000373218.5:0 NM_004096:0 AK313724:0 BC050633:3 BC005057:216 AB385553:236 DQ893105:237 DQ896377:237 CU674981:238 KJ891097:238 CR542240:239 BT007317:239 L36056:239 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1 |
|end=70404163 | |end=70404163 | ||
|end_of_center_position=70404147 | |end_of_center_position=70404147 | ||
|entrez_id=1979 | |entrez_id=1979 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
| − | |gene_alias=4EBP2 | + | |gene_alias=4EBP2{{!}}PHASII |
|gene_description=eukaryotic translation initiation factor 4E binding protein 2 | |gene_description=eukaryotic translation initiation factor 4E binding protein 2 | ||
|gene_id=1979 | |gene_id=1979 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_004096 | |nearest_refseq=NM_004096 | ||
|nearest_unigene=Hs.621200 | |nearest_unigene=Hs.621200 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=70404129 | |start=70404129 | ||
|start_of_center_position=70404146 | |start_of_center_position=70404146 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=AK313724 | + | |transcript_name=ENST00000373218.5 NM_004096 AK313724 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105381.1 | |tss_id=hg_105381.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B2R9B9 | + | |uniprot_id=A0A024QZM3 B2R9B9 Q13542 |
}} | }} | ||
Revision as of 18:12, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 70404146 |
|---|---|
| End of the center position in the TSS region: | 70404147 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000373218.5 NM_004096 AK313724 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000373218.5:0 NM_004096:0 AK313724:0 BC050633:3 BC005057:216 AB385553:236 DQ893105:237 DQ896377:237 CU674981:238 KJ891097:238 CR542240:239 BT007317:239 L36056:239 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_004096 |
| Entrez ID: | 1979 |
| Nearest Unigene: | Hs.621200 |
| Nearest Refseq: | NM_004096 |
| Nearest Ensembl: | ENSG00000148730 |
| Gene Name: | eukaryotic translation initiation factor 4E binding protein 2 |
| Gene Alias: | 4EBP2|PHASII |
| Gene Description: | eukaryotic translation initiation factor 4E binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
