Difference between revisions of "TSS:Hg 1054.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=-10 |entrez_id=51154 |gc_percent=0.701493 |gene_alias=C1orf33|MRT4|dJ657E11.4 |gene_description="MRT4 homolog, ribosome maturati...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |MRT4= | ||
| + | |all_trans=LF206694:0 MA442271:0 ENST00000330263.5:205 NM_016183:205 AK027569:205 AF173378:206 BC003013:207 BC006504:207 AK024227:220 AY303790:225 AK126387:233 ENST00000493700.1:235 KJ898840:236 AK295328:236 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| − | |distance_to_tss=- | + | |dJ657E11.4= |
| − | |entrez_id= | + | |distance=0 |
| + | |distance_to_tss=-47 | ||
| + | |end=19251600 | ||
| + | |end_of_center_position=19251572 | ||
| + | |entrez_id=23065 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias= | + | |gene_alias=CAVIPMR{{!}}KIAA0090 |
| − | | | + | |gene_description=ER membrane protein complex subunit 1 |
| − | | | + | |gene_id=51154 |
| + | |gene_name=EMC1 | ||
| + | |gene_source=HGNC:18477 | ||
| + | |gene_symbol=MRTO4 | ||
| + | |gene_synonyms=MRT4 dJ657E11.4 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |nearest_ensembl= | + | |hgnc_mgi_id=HGNC:18477 |
| − | |nearest_promoter_id= | + | |nearest_ensembl=ENSG00000127463 |
| − | |nearest_refseq= | + | |nearest_promoter_id=NM_015047 |
| − | |nearest_unigene=Hs. | + | |nearest_refseq=NM_015047 |
| + | |nearest_unigene=Hs.439200 | ||
| + | |num_trans=14 | ||
| + | |species=human | ||
| + | |start=19251542 | ||
| + | |start_of_center_position=19251571 | ||
| + | |strand=+ | ||
| + | |transcript_name=LF206694 MA442271 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_1054.1 | |tss_id=hg_1054.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9UKD2 | ||
}} | }} | ||
Latest revision as of 18:13, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 19251571 |
|---|---|
| End of the center position in the TSS region: | 19251572 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF206694 MA442271 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | LF206694:0 MA442271:0 ENST00000330263.5:205 NM_016183:205 AK027569:205 AF173378:206 BC003013:207 BC006504:207 AK024227:220 AY303790:225 AK126387:233 ENST00000493700.1:235 KJ898840:236 AK295328:236 |
TATA-Box annotation
| Distance to TSS: | -47 |
|---|---|
| Nearest PromoterID: | NM_015047 |
| Entrez ID: | 23065 |
| Nearest Unigene: | Hs.439200 |
| Nearest Refseq: | NM_015047 |
| Nearest Ensembl: | ENSG00000127463 |
| Gene Name: | EMC1 |
| Gene Alias: | CAVIPMR|KIAA0090 |
| Gene Description: | ER membrane protein complex subunit 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
