Difference between revisions of "TSS:Hg 105401.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AB462932:230 BC140263:230 ENST00000373208.5 | + | |all_trans=ENST00000373207.2:-48 NM_080722:-48 NM_139155:-48 AB462932:230 BC140263:230 ENST00000373208.5:231 AF358666:231 AJ345098:231 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
| − | |distance= | + | |distance=-48 |
|distance_to_tss=57 | |distance_to_tss=57 | ||
|end=70672572 | |end=70672572 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:14899 | |hgnc_mgi_id=HGNC:14899 | ||
|nearest_ensembl=ENSG00000138316 | |nearest_ensembl=ENSG00000138316 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_139155 |
|nearest_refseq=NM_080722 | |nearest_refseq=NM_080722 | ||
|nearest_unigene=Hs.352156 | |nearest_unigene=Hs.352156 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=70672553 | |start=70672553 | ||
|start_of_center_position=70672562 | |start_of_center_position=70672562 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000373207.2 NM_080722 NM_139155 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_105401.1 | |tss_id=hg_105401.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q8WXS8 |
}} | }} | ||
Revision as of 18:13, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 70672562 |
|---|---|
| End of the center position in the TSS region: | 70672563 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000373207.2 NM_080722 NM_139155 |
|---|---|
| Distance: | -48 |
| Num_trans: | 8 |
| All_trans: | ENST00000373207.2:-48 NM_080722:-48 NM_139155:-48 AB462932:230 BC140263:230 ENST00000373208.5:231 AF358666:231 AJ345098:231 |
TATA-Box annotation
| Distance to TSS: | 57 |
|---|---|
| Nearest PromoterID: | NM_139155 |
| Entrez ID: | 140766 |
| Nearest Unigene: | Hs.352156 |
| Nearest Refseq: | NM_080722 |
| Nearest Ensembl: | ENSG00000138316 |
| Gene Name: | ADAM metallopeptidase with thrombospondin type 1 motif 14 |
| Gene Alias: | - |
| Gene Description: | ADAM metallopeptidase with thrombospondin type 1 motif 14 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
