Difference between revisions of "TSS:Hg 105444.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=5549 |entrez_id=64072 |gc_percent=0.462687 |gene_alias=CDHR23|USH1D |gene_description=cadherin related 23 |gene_name=CDH23 |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |USH1D= | ||
| + | |all_trans=CU678651:0 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance=0 | ||
|distance_to_tss=5549 | |distance_to_tss=5549 | ||
| + | |end=71817442 | ||
| + | |end_of_center_position=71817433 | ||
|entrez_id=64072 | |entrez_id=64072 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| − | |gene_alias=CDHR23 | + | |gene_alias=CDHR23{{!}}PITA5{{!}}USH1D |
|gene_description=cadherin related 23 | |gene_description=cadherin related 23 | ||
|gene_name=CDH23 | |gene_name=CDH23 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_022124 | |nearest_refseq=NM_022124 | ||
|nearest_unigene=Hs.656032 | |nearest_unigene=Hs.656032 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=71817422 | ||
| + | |start_of_center_position=71817432 | ||
| + | |strand=+ | ||
| + | |transcript_name=CU678651 | ||
| + | |tss_classification=no | ||
|tss_id=hg_105444.1 | |tss_id=hg_105444.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:14, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 71817432 |
|---|---|
| End of the center position in the TSS region: | 71817433 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | CU678651 |
|---|---|
| Distance: | 0 |
| Num_trans: | 1 |
| All_trans: | CU678651:0 |
TATA-Box annotation
| Distance to TSS: | 5549 |
|---|---|
| Nearest PromoterID: | NM_001171936 |
| Entrez ID: | 64072 |
| Nearest Unigene: | Hs.656032 |
| Nearest Refseq: | NM_022124 |
| Nearest Ensembl: | ENSG00000107736 |
| Gene Name: | CDH23 |
| Gene Alias: | CDHR23|PITA5|USH1D |
| Gene Description: | cadherin related 23 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
