Difference between revisions of "TSS:Hg 105479.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=-116 | ||
| + | |end=72088686 | ||
| + | |end_of_center_position=72088668 | ||
|entrez_id=9806 | |entrez_id=9806 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
|gene_alias=testican-2 | |gene_alias=testican-2 | ||
| − | |gene_description= | + | |gene_description=SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 |
|gene_name=SPOCK2 | |gene_name=SPOCK2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_014767 | |nearest_refseq=NM_014767 | ||
|nearest_unigene=Hs.523009 | |nearest_unigene=Hs.523009 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=72088648 | ||
| + | |start_of_center_position=72088667 | ||
| + | |strand=+ | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105479.1 | |tss_id=hg_105479.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:15, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 72088667 |
|---|---|
| End of the center position in the TSS region: | 72088668 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -116 |
|---|---|
| Nearest PromoterID: | NM_001244950 |
| Entrez ID: | 9806 |
| Nearest Unigene: | Hs.523009 |
| Nearest Refseq: | NM_014767 |
| Nearest Ensembl: | ENSG00000107742 |
| Gene Name: | SPOCK2 |
| Gene Alias: | testican-2 |
| Gene Description: | SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
