Difference between revisions of "TSS:Hg 105492.1"
From referenceTSS
| Line 2: | Line 2: | ||
|REDD-1= | |REDD-1= | ||
|REDD1= | |REDD1= | ||
| − | |all_trans=AY090097:-1 | + | |all_trans=AY090097:-1 BC000708:11 BC015236:-58 AF335324:-67 BC007714:-72 ENST00000473155.2:-79 ENST00000681898.1:-79 ENST00000307365.4:-79 NM_019058:-79 AK000507:-79 ENST00000471240.2:-83 AL136668:-83 ENST00000491934.3:-84 LP764833:-84 LQ946190:-84 LF208755:-97 MA444332:-97 LF322514:119 MA558091:119 AM392607:202 DQ890984:202 DQ894159:202 AB587474:204 KJ894039:205 LF322513:230 MA558090:230 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=-1 | |distance=-1 | ||
| − | |distance_to_tss= | + | |distance_to_tss=83 |
|end=72274011 | |end=72274011 | ||
|end_of_center_position=72274007 | |end_of_center_position=72274007 | ||
|entrez_id=54541 | |entrez_id=54541 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=Dig2 | + | |gene_alias=Dig2{{!}}REDD-1{{!}}REDD1 |
|gene_description=DNA damage inducible transcript 4 | |gene_description=DNA damage inducible transcript 4 | ||
|gene_id=54541 | |gene_id=54541 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_019058 | |nearest_refseq=NM_019058 | ||
|nearest_unigene=Hs.744875 | |nearest_unigene=Hs.744875 | ||
| − | |num_trans= | + | |num_trans=26 |
|species=human | |species=human | ||
|start=72274002 | |start=72274002 | ||
Revision as of 18:15, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 72274006 |
|---|---|
| End of the center position in the TSS region: | 72274007 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AY090097 |
|---|---|
| Distance: | -1 |
| Num_trans: | 26 |
| All_trans: | AY090097:-1 BC000708:11 BC015236:-58 AF335324:-67 BC007714:-72 ENST00000473155.2:-79 ENST00000681898.1:-79 ENST00000307365.4:-79 NM_019058:-79 AK000507:-79 ENST00000471240.2:-83 AL136668:-83 ENST00000491934.3:-84 LP764833:-84 LQ946190:-84 LF208755:-97 MA444332:-97 LF322514:119 MA558091:119 AM392607:202 DQ890984:202 DQ894159:202 AB587474:204 KJ894039:205 LF322513:230 MA558090:230 |
TATA-Box annotation
| Distance to TSS: | 83 |
|---|---|
| Nearest PromoterID: | NM_019058 |
| Entrez ID: | 54541 |
| Nearest Unigene: | Hs.744875 |
| Nearest Refseq: | NM_019058 |
| Nearest Ensembl: | ENSG00000168209 |
| Gene Name: | DNA damage inducible transcript 4 |
| Gene Alias: | Dig2|REDD-1|REDD1 |
| Gene Description: | DNA damage inducible transcript 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
