Difference between revisions of "TSS:Hg 105522.1"
From referenceTSS
| Line 2: | Line 2: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=1342 | |distance_to_tss=1342 | ||
|end=73095641 | |end=73095641 | ||
| Line 13: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000122884 | |nearest_ensembl=ENSG00000122884 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_000917 |
|nearest_refseq=NM_000917 | |nearest_refseq=NM_000917 | ||
|nearest_unigene=Hs.500047 | |nearest_unigene=Hs.500047 | ||
| Line 21: | Line 21: | ||
|start_of_center_position=73095631 | |start_of_center_position=73095631 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=73(CCTTTTAGATCA,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 18:16, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 73095631 |
|---|---|
| End of the center position in the TSS region: | 73095632 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 1342 |
|---|---|
| Nearest PromoterID: | NM_000917 |
| Entrez ID: | 5033 |
| Nearest Unigene: | Hs.500047 |
| Nearest Refseq: | NM_000917 |
| Nearest Ensembl: | ENSG00000122884 |
| Gene Name: | P4HA1 |
| Gene Alias: | P4HA |
| Gene Description: | prolyl 4-hydroxylase subunit alpha 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 73(CCTTTTAGATCA,+,0.00) |
