Difference between revisions of "TSS:Hg 105581.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=31757 |entrez_id=26985 |gc_percent=0.527363 |gene_alias=- |gene_description=adaptor related protein complex 3 mu 1 subunit |gen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=LF333236:-25 MA568813:-25 LF333234:-156 MA568811:-156 LF333232:-299 MA568809:-299 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance_to_tss= | + | |distance=-25 |
| + | |distance_to_tss=31794 | ||
| + | |end=74119051 | ||
| + | |end_of_center_position=74119035 | ||
|entrez_id=26985 | |entrez_id=26985 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description=adaptor related protein complex 3 mu 1 | + | |gene_description=adaptor related protein complex 3 subunit mu 1 |
|gene_name=AP3M1 | |gene_name=AP3M1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_012095 | |nearest_refseq=NM_012095 | ||
|nearest_unigene=Hs.500104 | |nearest_unigene=Hs.500104 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=74119017 | ||
| + | |start_of_center_position=74119034 | ||
| + | |strand=+ | ||
| + | |transcript_name=LF333236 MA568813 | ||
| + | |tss_classification=no | ||
|tss_id=hg_105581.1 | |tss_id=hg_105581.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:17, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 74119034 |
|---|---|
| End of the center position in the TSS region: | 74119035 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | LF333236 MA568813 |
|---|---|
| Distance: | -25 |
| Num_trans: | 6 |
| All_trans: | LF333236:-25 MA568813:-25 LF333234:-156 MA568811:-156 LF333232:-299 MA568809:-299 |
TATA-Box annotation
| Distance to TSS: | 31794 |
|---|---|
| Nearest PromoterID: | NM_001320264 |
| Entrez ID: | 26985 |
| Nearest Unigene: | Hs.500104 |
| Nearest Refseq: | NM_012095 |
| Nearest Ensembl: | ENSG00000185009 |
| Gene Name: | AP3M1 |
| Gene Alias: | - |
| Gene Description: | adaptor related protein complex 3 subunit mu 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
