Difference between revisions of "TSS:Hg 10560.1"
From referenceTSS
| Line 2: | Line 2: | ||
|MAGP-1= | |MAGP-1= | ||
|MAGP1= | |MAGP1= | ||
| − | |all_trans= | + | |all_trans=NM_001135248:3 BC015039:3 AK222751:41 ENST00000476788.5:49 ENST00000490075.5:60 BC028033:60 ENST00000375535.4:61 NM_002403:61 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| Line 11: | Line 11: | ||
|entrez_id=4237 | |entrez_id=4237 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
| − | |gene_alias=MAGP | + | |gene_alias=MAGP{{!}}MAGP-1{{!}}MAGP1 |
| − | |gene_description= | + | |gene_description=microfibril associated protein 2 |
|gene_id=4237 | |gene_id=4237 | ||
| − | |gene_name= | + | |gene_name=microfibril associated protein 2 |
|gene_source=HGNC:7033 | |gene_source=HGNC:7033 | ||
|gene_symbol=MFAP2 | |gene_symbol=MFAP2 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:7033 | |hgnc_mgi_id=HGNC:7033 | ||
|nearest_ensembl=ENSG00000117122 | |nearest_ensembl=ENSG00000117122 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001135248 |
|nearest_refseq=NM_002403 | |nearest_refseq=NM_002403 | ||
|nearest_unigene=Hs.389137 | |nearest_unigene=Hs.389137 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=16980680 | |start=16980680 | ||
|start_of_center_position=16980688 | |start_of_center_position=16980688 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_001135248 BC015039 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10560.1 | |tss_id=hg_10560.1 | ||
Revision as of 18:17, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 16980688 |
|---|---|
| End of the center position in the TSS region: | 16980689 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001135248 BC015039 |
|---|---|
| Distance: | 3 |
| Num_trans: | 8 |
| All_trans: | NM_001135248:3 BC015039:3 AK222751:41 ENST00000476788.5:49 ENST00000490075.5:60 BC028033:60 ENST00000375535.4:61 NM_002403:61 |
TATA-Box annotation
| Distance to TSS: | -10 |
|---|---|
| Nearest PromoterID: | NM_001135248 |
| Entrez ID: | 4237 |
| Nearest Unigene: | Hs.389137 |
| Nearest Refseq: | NM_002403 |
| Nearest Ensembl: | ENSG00000117122 |
| Gene Name: | microfibril associated protein 2 |
| Gene Alias: | MAGP|MAGP-1|MAGP1 |
| Gene Description: | microfibril associated protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
