Difference between revisions of "TSS:Hg 105602.1"
From referenceTSS
| Line 4: | Line 4: | ||
|MYST4= | |MYST4= | ||
|ZC2HC6B= | |ZC2HC6B= | ||
| − | |all_trans= | + | |all_trans=ENST00000648892.1:0 ENST00000647890.1:0 NM_001256468:0 NM_001256469:0 ENST00000372724.6:27 LF333256:-32 MA568833:-32 ENST00000649657.1:130 ENST00000372714.6:140 ENST00000649442.1:158 ENST00000648539.1:174 ENST00000647666.1:178 ENST00000648048.1:178 ENST00000287239.10:178 NM_001370132:178 NM_001370144:178 NM_001370142:178 NM_001370137:178 NM_001370135:178 NM_012330:178 AK074816:178 ENST00000649375.1:181 BC014143:199 BC048199:199 AF217500:203 ENST00000650330.1:206 ENST00000650380.1:213 BC150618:231 LF333257:282 MA568834:282 ENST00000647637.1:459 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| Line 13: | Line 13: | ||
|entrez_id=23522 | |entrez_id=23522 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| − | |gene_alias=GTPTS | + | |gene_alias=GTPTS{{!}}MORF{{!}}MOZ2{{!}}MYST4{{!}}ZC2HC6B{{!}}qkf{{!}}querkopf |
|gene_description=lysine acetyltransferase 6B | |gene_description=lysine acetyltransferase 6B | ||
|gene_id=23522 | |gene_id=23522 | ||
| Line 23: | Line 23: | ||
|hgnc_mgi_id=HGNC:17582 | |hgnc_mgi_id=HGNC:17582 | ||
|nearest_ensembl=ENSG00000156650 | |nearest_ensembl=ENSG00000156650 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001256469 |
|nearest_refseq=NM_012330 | |nearest_refseq=NM_012330 | ||
|nearest_unigene=Hs.35758 | |nearest_unigene=Hs.35758 | ||
| − | |num_trans= | + | |num_trans=31 |
|qkf= | |qkf= | ||
|querkopf= | |querkopf= | ||
| Line 33: | Line 33: | ||
|start_of_center_position=74826414 | |start_of_center_position=74826414 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000648892.1 ENST00000647890.1 NM_001256468 NM_001256469 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105602.1 | |tss_id=hg_105602.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q8WYB5 | + | |uniprot_id=A0A3B3ITV5 Q8WYB5 |
}} | }} | ||
Revision as of 18:18, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 74826414 |
|---|---|
| End of the center position in the TSS region: | 74826415 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000648892.1 ENST00000647890.1 NM_001256468 NM_001256469 |
|---|---|
| Distance: | 0 |
| Num_trans: | 31 |
| All_trans: | ENST00000648892.1:0 ENST00000647890.1:0 NM_001256468:0 NM_001256469:0 ENST00000372724.6:27 LF333256:-32 MA568833:-32 ENST00000649657.1:130 ENST00000372714.6:140 ENST00000649442.1:158 ENST00000648539.1:174 ENST00000647666.1:178 ENST00000648048.1:178 ENST00000287239.10:178 NM_001370132:178 NM_001370144:178 NM_001370142:178 NM_001370137:178 NM_001370135:178 NM_012330:178 AK074816:178 ENST00000649375.1:181 BC014143:199 BC048199:199 AF217500:203 ENST00000650330.1:206 ENST00000650380.1:213 BC150618:231 LF333257:282 MA568834:282 ENST00000647637.1:459 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_001256469 |
| Entrez ID: | 23522 |
| Nearest Unigene: | Hs.35758 |
| Nearest Refseq: | NM_012330 |
| Nearest Ensembl: | ENSG00000156650 |
| Gene Name: | lysine acetyltransferase 6B |
| Gene Alias: | GTPTS|MORF|MOZ2|MYST4|ZC2HC6B|qkf|querkopf |
| Gene Description: | lysine acetyltransferase 6B |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
