Difference between revisions of "TSS:Hg 105618.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000298468.9:137 ENST00000543351.5:137 NM_001184823:137 | + | |all_trans=ENST00000298468.9:137 ENST00000543351.5:137 NM_001184823:137 NM_001184783:137 NM_001324089:137 NM_001324090:137 NM_001324088:137 NM_001324087:137 NM_003375:137 LF333487:171 MA569064:171 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:12672 | |hgnc_mgi_id=HGNC:12672 | ||
|nearest_ensembl=ENSG00000165637 | |nearest_ensembl=ENSG00000165637 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001324089 |
|nearest_refseq=NM_003375 | |nearest_refseq=NM_003375 | ||
|nearest_unigene=Hs.355927 | |nearest_unigene=Hs.355927 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=75210006 | |start=75210006 | ||
|start_of_center_position=75210011 | |start_of_center_position=75210011 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000298468.9 ENST00000543351.5 NM_001184823 | + | |transcript_name=ENST00000298468.9 ENST00000543351.5 NM_001184823 NM_001184783 NM_001324089 NM_001324090 NM_001324088 NM_001324087 NM_003375 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105618.1 | |tss_id=hg_105618.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A0A024QZT0 A0A0A0MR02 P45880 | + | |uniprot_id=A0A024QZT0 A0A0A0MR02 B4DKM5 P45880 |
}} | }} | ||
Revision as of 18:18, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 75210011 |
|---|---|
| End of the center position in the TSS region: | 75210012 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000298468.9 ENST00000543351.5 NM_001184823 NM_001184783 NM_001324089 NM_001324090 NM_001324088 NM_001324087 NM_003375 |
|---|---|
| Distance: | 137 |
| Num_trans: | 11 |
| All_trans: | ENST00000298468.9:137 ENST00000543351.5:137 NM_001184823:137 NM_001184783:137 NM_001324089:137 NM_001324090:137 NM_001324088:137 NM_001324087:137 NM_003375:137 LF333487:171 MA569064:171 |
TATA-Box annotation
| Distance to TSS: | -142 |
|---|---|
| Nearest PromoterID: | NM_001324089 |
| Entrez ID: | 7417 |
| Nearest Unigene: | Hs.355927 |
| Nearest Refseq: | NM_003375 |
| Nearest Ensembl: | ENSG00000165637 |
| Gene Name: | voltage dependent anion channel 2 |
| Gene Alias: | POR |
| Gene Description: | voltage dependent anion channel 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
