Difference between revisions of "TSS:Hg 105621.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000470745.5:0 ENST00000475142.5:0 ENST00000481876.5 | + | |all_trans=ENST00000470745.5:0 ENST00000475142.5:0 ENST00000481876.5:0 BC000165:0 BC072407:0 AK315919:0 AK296635:0 ENST00000472137.5:-1 BC012883:3 ENST00000313132.8:4 L08666:4 ENST00000498394.5:12 ENST00000468285.1:20 ENST00000332211.10:-25 LF333488:52 MA569065:52 ENST00000344036.8:-131 ENST00000447677.5:190 LF384970:-234 MA620547:-234 L06328:301 CU687220:314 KJ892371:314 GQ891299:315 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:12672 | |hgnc_mgi_id=HGNC:12672 | ||
|nearest_ensembl=ENSG00000165637 | |nearest_ensembl=ENSG00000165637 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001184823 |
|nearest_refseq=NM_003375 | |nearest_refseq=NM_003375 | ||
|nearest_unigene=Hs.355927 | |nearest_unigene=Hs.355927 | ||
| − | |num_trans= | + | |num_trans=24 |
|species=human | |species=human | ||
|start=75210775 | |start=75210775 | ||
|start_of_center_position=75210809 | |start_of_center_position=75210809 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000470745.5 ENST00000475142.5 ENST00000481876.5 | + | |transcript_name=ENST00000470745.5 ENST00000475142.5 ENST00000481876.5 BC000165 BC072407 AK315919 AK296635 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105621.1 | |tss_id=hg_105621.1 | ||
Revision as of 18:18, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 75210809 |
|---|---|
| End of the center position in the TSS region: | 75210810 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000470745.5 ENST00000475142.5 ENST00000481876.5 BC000165 BC072407 AK315919 AK296635 |
|---|---|
| Distance: | 0 |
| Num_trans: | 24 |
| All_trans: | ENST00000470745.5:0 ENST00000475142.5:0 ENST00000481876.5:0 BC000165:0 BC072407:0 AK315919:0 AK296635:0 ENST00000472137.5:-1 BC012883:3 ENST00000313132.8:4 L08666:4 ENST00000498394.5:12 ENST00000468285.1:20 ENST00000332211.10:-25 LF333488:52 MA569065:52 ENST00000344036.8:-131 ENST00000447677.5:190 LF384970:-234 MA620547:-234 L06328:301 CU687220:314 KJ892371:314 GQ891299:315 |
TATA-Box annotation
| Distance to TSS: | 656 |
|---|---|
| Nearest PromoterID: | NM_001184823 |
| Entrez ID: | 7417 |
| Nearest Unigene: | Hs.355927 |
| Nearest Refseq: | NM_003375 |
| Nearest Ensembl: | ENSG00000165637 |
| Gene Name: | voltage dependent anion channel 2 |
| Gene Alias: | POR |
| Gene Description: | voltage dependent anion channel 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
