Difference between revisions of "TSS:Hg 105622.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000447677.5 | + | |all_trans=ENST00000447677.5:0 L06328:108 LF333488:-109 MA569065:-109 CU687220:121 KJ892371:121 GQ891299:122 ENST00000468285.1:-141 ENST00000498394.5:-149 ENST00000313132.8:-157 L08666:-157 BC012883:-158 AK296635:-170 AK315919:-176 BC072407:-190 ENST00000481876.5:-191 ENST00000475142.5:-192 BC000165:-200 ENST00000470745.5:-201 ENST00000472137.5:-230 ENST00000332211.10:-254 ENST00000344036.8:-360 ENST00000413289.1:419 LF384970:-463 MA620547:-463 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
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|hgnc_mgi_id=HGNC:12672 | |hgnc_mgi_id=HGNC:12672 | ||
|nearest_ensembl=ENSG00000165637 | |nearest_ensembl=ENSG00000165637 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001184823 |
|nearest_refseq=NM_003375 | |nearest_refseq=NM_003375 | ||
|nearest_unigene=Hs.355927 | |nearest_unigene=Hs.355927 | ||
| − | |num_trans= | + | |num_trans=25 |
|species=human | |species=human | ||
|start=75211004 | |start=75211004 | ||
|start_of_center_position=75211020 | |start_of_center_position=75211020 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000447677.5 | + | |transcript_name=ENST00000447677.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105622.1 | |tss_id=hg_105622.1 | ||
Revision as of 18:18, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 75211020 |
|---|---|
| End of the center position in the TSS region: | 75211021 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000447677.5 |
|---|---|
| Distance: | 0 |
| Num_trans: | 25 |
| All_trans: | ENST00000447677.5:0 L06328:108 LF333488:-109 MA569065:-109 CU687220:121 KJ892371:121 GQ891299:122 ENST00000468285.1:-141 ENST00000498394.5:-149 ENST00000313132.8:-157 L08666:-157 BC012883:-158 AK296635:-170 AK315919:-176 BC072407:-190 ENST00000481876.5:-191 ENST00000475142.5:-192 BC000165:-200 ENST00000470745.5:-201 ENST00000472137.5:-230 ENST00000332211.10:-254 ENST00000344036.8:-360 ENST00000413289.1:419 LF384970:-463 MA620547:-463 |
TATA-Box annotation
| Distance to TSS: | 867 |
|---|---|
| Nearest PromoterID: | NM_001184823 |
| Entrez ID: | 7417 |
| Nearest Unigene: | Hs.355927 |
| Nearest Refseq: | NM_003375 |
| Nearest Ensembl: | ENSG00000165637 |
| Gene Name: | voltage dependent anion channel 2 |
| Gene Alias: | POR |
| Gene Description: | voltage dependent anion channel 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
