Difference between revisions of "TSS:Hg 105624.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=LF209961:0 MA445538:0 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=1394 |
|end=75234570 | |end=75234570 | ||
| + | |end_of_center_position=75234564 | ||
|entrez_id=118881 | |entrez_id=118881 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| Line 15: | Line 17: | ||
|nearest_refseq=NM_144589 | |nearest_refseq=NM_144589 | ||
|nearest_unigene=Hs.355333 | |nearest_unigene=Hs.355333 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=75234556 | |start=75234556 | ||
| + | |start_of_center_position=75234563 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-33(GGGTATAAGAGG,-,0.00) |
| − | |transcript_name= | + | |transcript_name=LF209961 MA445538 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105624.1 | |tss_id=hg_105624.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:18, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 75234563 |
|---|---|
| End of the center position in the TSS region: | 75234564 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | LF209961 MA445538 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | LF209961:0 MA445538:0 |
TATA-Box annotation
| Distance to TSS: | 1394 |
|---|---|
| Nearest PromoterID: | NM_144589 |
| Entrez ID: | 118881 |
| Nearest Unigene: | Hs.355333 |
| Nearest Refseq: | NM_144589 |
| Nearest Ensembl: | ENSG00000165644 |
| Gene Name: | COMTD1 |
| Gene Alias: | - |
| Gene Description: | catechol-O-methyltransferase domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(GGGTATAAGAGG,-,0.00) |
