Difference between revisions of "TSS:Hg 105632.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|NCRNA00245= | |NCRNA00245= | ||
| − | |all_trans=NR_110300:-127 BC029963:-127 ENST00000484411.1 | + | |all_trans=LF333506:56 MA569083:56 NR_110300:-127 BC029963:-127 ENST00000484411.1:-128 ENST00000527641.1:132 NR_110302:132 LF333505:-233 MA569082:-233 ENST00000491557.2:-248 NR_024422:-248 LF209963:-329 MA445540:-329 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance= | + | |distance=56 |
|distance_to_tss=141 | |distance_to_tss=141 | ||
|end=75404033 | |end=75404033 | ||
| Line 10: | Line 10: | ||
|entrez_id=100131213 | |entrez_id=100131213 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=C10orf41 | + | |gene_alias=C10orf41{{!}}NCRNA00245 |
|gene_description=ZNF503 antisense RNA 2 | |gene_description=ZNF503 antisense RNA 2 | ||
|gene_id=100131213 | |gene_id=100131213 | ||
| − | |gene_name=ZNF503 | + | |gene_name=ZNF503-AS2 |
|gene_source=HGNC:23525 | |gene_source=HGNC:23525 | ||
|gene_symbol=ZNF503-AS2 | |gene_symbol=ZNF503-AS2 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NR_024421 | |nearest_refseq=NR_024421 | ||
|nearest_unigene=Hs.534598 | |nearest_unigene=Hs.534598 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=75404003 | |start=75404003 | ||
|start_of_center_position=75404018 | |start_of_center_position=75404018 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF333506 MA569083 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105632.1 | |tss_id=hg_105632.1 | ||
Latest revision as of 18:18, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 75404018 |
|---|---|
| End of the center position in the TSS region: | 75404019 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF333506 MA569083 |
|---|---|
| Distance: | 56 |
| Num_trans: | 13 |
| All_trans: | LF333506:56 MA569083:56 NR_110300:-127 BC029963:-127 ENST00000484411.1:-128 ENST00000527641.1:132 NR_110302:132 LF333505:-233 MA569082:-233 ENST00000491557.2:-248 NR_024422:-248 LF209963:-329 MA445540:-329 |
TATA-Box annotation
| Distance to TSS: | 141 |
|---|---|
| Nearest PromoterID: | NR_110300 |
| Entrez ID: | 100131213 |
| Nearest Unigene: | Hs.534598 |
| Nearest Refseq: | NR_024421 |
| Nearest Ensembl: | ENSG00000237149 |
| Gene Name: | ZNF503-AS2 |
| Gene Alias: | C10orf41|NCRNA00245 |
| Gene Description: | ZNF503 antisense RNA 2 |
| Gene Type: | ncRNA |
| CpG%: | 0.05 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
