Difference between revisions of "TSS:Hg 105667.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |KCa1.1= | ||
| + | |MaxiK= | ||
| + | |SAKCA= | ||
| + | |SLO= | ||
| + | |SLO-ALPHA= | ||
| + | |SLO1= | ||
| + | |all_trans=DQ594509:-51 DQ574439:60 DQ570811:-181 DQ601645:186 DQ599025:201 DQ579054:239 DQ577681:263 DQ601924:480 | ||
| + | |bA205K10.1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance_to_tss=- | + | |distance=-51 |
| + | |distance_to_tss=-126097 | ||
| + | |end=77763907 | ||
| + | |end_of_center_position=77763905 | ||
|entrez_id=3778 | |entrez_id=3778 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
| − | |gene_alias=BKTM | + | |gene_alias=BKTM{{!}}CADEDS{{!}}KCa1.1{{!}}MaxiK{{!}}PNKD3{{!}}SAKCA{{!}}SLO{{!}}SLO-ALPHA{{!}}SLO1{{!}}bA205K10.1{{!}}hSlo{{!}}mSLO1 |
|gene_description=potassium calcium-activated channel subfamily M alpha 1 | |gene_description=potassium calcium-activated channel subfamily M alpha 1 | ||
|gene_name=KCNMA1 | |gene_name=KCNMA1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hSlo= | ||
| + | |mSLO1= | ||
|nearest_ensembl=ENSG00000156113 | |nearest_ensembl=ENSG00000156113 | ||
|nearest_promoter_id=NM_001271522 | |nearest_promoter_id=NM_001271522 | ||
|nearest_refseq=NM_002247 | |nearest_refseq=NM_002247 | ||
|nearest_unigene=Hs.144795 | |nearest_unigene=Hs.144795 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=77763902 | ||
| + | |start_of_center_position=77763904 | ||
| + | |strand=+ | ||
| + | |transcript_name=DQ594509 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105667.1 | |tss_id=hg_105667.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:19, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 77763904 |
|---|---|
| End of the center position in the TSS region: | 77763905 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | DQ594509 |
|---|---|
| Distance: | -51 |
| Num_trans: | 8 |
| All_trans: | DQ594509:-51 DQ574439:60 DQ570811:-181 DQ601645:186 DQ599025:201 DQ579054:239 DQ577681:263 DQ601924:480 |
TATA-Box annotation
| Distance to TSS: | -126097 |
|---|---|
| Nearest PromoterID: | NM_001271522 |
| Entrez ID: | 3778 |
| Nearest Unigene: | Hs.144795 |
| Nearest Refseq: | NM_002247 |
| Nearest Ensembl: | ENSG00000156113 |
| Gene Name: | KCNMA1 |
| Gene Alias: | BKTM|CADEDS|KCa1.1|MaxiK|PNKD3|SAKCA|SLO|SLO-ALPHA|SLO1|bA205K10.1|hSlo|mSLO1 |
| Gene Description: | potassium calcium-activated channel subfamily M alpha 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
