Difference between revisions of "TSS:Hg 105689.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000665488.1:-350 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=-350 |
| − | |distance_to_tss= | + | |distance_to_tss=34671 |
|end=78302017 | |end=78302017 | ||
|end_of_center_position=78302013 | |end_of_center_position=78302013 | ||
| Line 10: | Line 11: | ||
|gene_alias=C10orf101 | |gene_alias=C10orf101 | ||
|gene_description=long intergenic non-protein coding RNA 595 | |gene_description=long intergenic non-protein coding RNA 595 | ||
| − | |gene_name=LINC00595 | + | |gene_id=414243 |
| + | |gene_name=long intergenic non-protein coding RNA 595 | ||
| + | |gene_source=HGNC:31430 | ||
| + | |gene_symbol=LINC00595 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:31430 | ||
|nearest_ensembl=ENSG00000230417 | |nearest_ensembl=ENSG00000230417 | ||
|nearest_promoter_id=NR_073447 | |nearest_promoter_id=NR_073447 | ||
|nearest_refseq=NR_073447 | |nearest_refseq=NR_073447 | ||
|nearest_unigene=Hs.55047 | |nearest_unigene=Hs.55047 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=78302008 | |start=78302008 | ||
|start_of_center_position=78302012 | |start_of_center_position=78302012 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000665488.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_105689.1 | |tss_id=hg_105689.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:20, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 78302012 |
|---|---|
| End of the center position in the TSS region: | 78302013 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000665488.1 |
|---|---|
| Distance: | -350 |
| Num_trans: | 1 |
| All_trans: | ENST00000665488.1:-350 |
TATA-Box annotation
| Distance to TSS: | 34671 |
|---|---|
| Nearest PromoterID: | NR_073447 |
| Entrez ID: | 414243 |
| Nearest Unigene: | Hs.55047 |
| Nearest Refseq: | NR_073447 |
| Nearest Ensembl: | ENSG00000230417 |
| Gene Name: | long intergenic non-protein coding RNA 595 |
| Gene Alias: | C10orf101 |
| Gene Description: | long intergenic non-protein coding RNA 595 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
