Difference between revisions of "TSS:Hg 10569.1"
From referenceTSS
| Line 6: | Line 6: | ||
|SDH2= | |SDH2= | ||
|SDHIP= | |SDHIP= | ||
| − | |all_trans=ENST00000491274.5 | + | |all_trans=ENST00000491274.5:22 D10245:350 M32246:350 ENST00000475506.1:364 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 15: | Line 15: | ||
|entrez_id=6390 | |entrez_id=6390 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=CWS2 | + | |gene_alias=CWS2{{!}}IP{{!}}PGL4{{!}}SDH{{!}}SDH1{{!}}SDH2{{!}}SDHIP |
|gene_description=succinate dehydrogenase complex iron sulfur subunit B | |gene_description=succinate dehydrogenase complex iron sulfur subunit B | ||
|gene_id=6390 | |gene_id=6390 | ||
| Line 28: | Line 28: | ||
|nearest_refseq=NM_003000 | |nearest_refseq=NM_003000 | ||
|nearest_unigene=Hs.465924 | |nearest_unigene=Hs.465924 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=17045240 | |start=17045240 | ||
|start_of_center_position=17045251 | |start_of_center_position=17045251 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000491274.5 | + | |transcript_name=ENST00000491274.5 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_10569.1 | |tss_id=hg_10569.1 | ||
Revision as of 18:20, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17045251 |
|---|---|
| End of the center position in the TSS region: | 17045252 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000491274.5 |
|---|---|
| Distance: | 22 |
| Num_trans: | 4 |
| All_trans: | ENST00000491274.5:22 D10245:350 M32246:350 ENST00000475506.1:364 |
TATA-Box annotation
| Distance to TSS: | 8919 |
|---|---|
| Nearest PromoterID: | NM_003000 |
| Entrez ID: | 6390 |
| Nearest Unigene: | Hs.465924 |
| Nearest Refseq: | NM_003000 |
| Nearest Ensembl: | ENSG00000117118 |
| Gene Name: | succinate dehydrogenase complex iron sulfur subunit B |
| Gene Alias: | CWS2|IP|PGL4|SDH|SDH1|SDH2|SDHIP |
| Gene Description: | succinate dehydrogenase complex iron sulfur subunit B |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
