Difference between revisions of "TSS:Hg 105746.1"
From referenceTSS
| Line 3: | Line 3: | ||
|Cyp-D= | |Cyp-D= | ||
|CypD= | |CypD= | ||
| − | |all_trans=ENST00000478357.1 | + | |all_trans=ENST00000478357.1:-16 AK024490:-16 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=-16 | |distance=-16 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-70263 |
|end=79277218 | |end=79277218 | ||
|end_of_center_position=79277207 | |end_of_center_position=79277207 | ||
|entrez_id=10105 | |entrez_id=10105 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=CYP3 | + | |gene_alias=CYP3{{!}}CyP-M{{!}}Cyp-D{{!}}CypD |
|gene_description=peptidylprolyl isomerase F | |gene_description=peptidylprolyl isomerase F | ||
|gene_id=57178 | |gene_id=57178 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_005729 | |nearest_refseq=NM_005729 | ||
|nearest_unigene=Hs.381072 | |nearest_unigene=Hs.381072 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=79277194 | |start=79277194 | ||
|start_of_center_position=79277206 | |start_of_center_position=79277206 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000478357.1 | + | |transcript_name=ENST00000478357.1 AK024490 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105746.1 | |tss_id=hg_105746.1 | ||
Revision as of 18:21, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 79277206 |
|---|---|
| End of the center position in the TSS region: | 79277207 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000478357.1 AK024490 |
|---|---|
| Distance: | -16 |
| Num_trans: | 2 |
| All_trans: | ENST00000478357.1:-16 AK024490:-16 |
TATA-Box annotation
| Distance to TSS: | -70263 |
|---|---|
| Nearest PromoterID: | NM_005729 |
| Entrez ID: | 10105 |
| Nearest Unigene: | Hs.381072 |
| Nearest Refseq: | NM_005729 |
| Nearest Ensembl: | ENSG00000108179 |
| Gene Name: | zinc finger MIZ-type containing 1 |
| Gene Alias: | CYP3|CyP-M|Cyp-D|CypD |
| Gene Description: | peptidylprolyl isomerase F |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
