Difference between revisions of "TSS:Hg 105782.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-26064 |entrez_id=10105 |gc_percent=0.482587 |gene_alias=CYP3|CyP-M|Cyp-D|CypD |gene_description=peptidylprolyl isomerase F |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CyP-M= | ||
| + | |Cyp-D= | ||
| + | |CypD= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance_to_tss=- | + | |distance=NA |
| + | |distance_to_tss=-26069 | ||
| + | |end=79321405 | ||
| + | |end_of_center_position=79321400 | ||
|entrez_id=10105 | |entrez_id=10105 | ||
|gc_percent=0.482587 | |gc_percent=0.482587 | ||
| − | |gene_alias=CYP3 | + | |gene_alias=CYP3{{!}}CyP-M{{!}}Cyp-D{{!}}CypD |
|gene_description=peptidylprolyl isomerase F | |gene_description=peptidylprolyl isomerase F | ||
|gene_name=PPIF | |gene_name=PPIF | ||
| Line 12: | Line 19: | ||
|nearest_refseq=NM_005729 | |nearest_refseq=NM_005729 | ||
|nearest_unigene=Hs.381072 | |nearest_unigene=Hs.381072 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=79321394 | ||
| + | |start_of_center_position=79321399 | ||
| + | |strand=+ | ||
| + | |tata_box=48(GCCTCTTAAAGA,-,0.00),49(CCTCTTAAAGAC,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_105782.1 | |tss_id=hg_105782.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:22, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 79321399 |
|---|---|
| End of the center position in the TSS region: | 79321400 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -26069 |
|---|---|
| Nearest PromoterID: | NM_005729 |
| Entrez ID: | 10105 |
| Nearest Unigene: | Hs.381072 |
| Nearest Refseq: | NM_005729 |
| Nearest Ensembl: | ENSG00000108179 |
| Gene Name: | PPIF |
| Gene Alias: | CYP3|CyP-M|Cyp-D|CypD |
| Gene Description: | peptidylprolyl isomerase F |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 48(GCCTCTTAAAGA,-,0.00),49(CCTCTTAAAGAC,+,0.00) |
