Difference between revisions of "TSS:Hg 105808.1"
From referenceTSS
| Line 11: | Line 11: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=3400 | |distance_to_tss=3400 | ||
|end=79556475 | |end=79556475 | ||
| Line 17: | Line 17: | ||
|entrez_id=729238 | |entrez_id=729238 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
| − | |gene_alias=COLEC5 | + | |gene_alias=COLEC5{{!}}PSAP{{!}}PSP-A{{!}}PSPA{{!}}SFTP1{{!}}SFTPA2B{{!}}SP-2A{{!}}SP-A{{!}}SPA2{{!}}SPAII |
|gene_description=surfactant protein A2 | |gene_description=surfactant protein A2 | ||
|gene_name=SFTPA2 | |gene_name=SFTPA2 | ||
Latest revision as of 18:22, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 79556471 |
|---|---|
| End of the center position in the TSS region: | 79556472 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 3400 |
|---|---|
| Nearest PromoterID: | NM_001320814 |
| Entrez ID: | 729238 |
| Nearest Unigene: | Hs.523084 |
| Nearest Refseq: | NM_001098668 |
| Nearest Ensembl: | ENSG00000185303 |
| Gene Name: | SFTPA2 |
| Gene Alias: | COLEC5|PSAP|PSP-A|PSPA|SFTP1|SFTPA2B|SP-2A|SP-A|SPA2|SPAII |
| Gene Description: | surfactant protein A2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
