Difference between revisions of "TSS:Hg 10584.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC042141:0 AB384219:10 ENST00000375433.3:-14 | + | |all_trans=NM_001136204:0 BC042141:0 AB384219:10 ENST00000375433.3:-14 BC053908:-14 GQ901050:-14 LF383924:-16 MA619501:-16 BC142946:211 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-1 |
|end=17438547 | |end=17438547 | ||
|end_of_center_position=17438537 | |end_of_center_position=17438537 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_018715 | |nearest_refseq=NM_018715 | ||
|nearest_unigene=Hs.380857 | |nearest_unigene=Hs.380857 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=17438526 | |start=17438526 | ||
|start_of_center_position=17438536 | |start_of_center_position=17438536 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=BC042141 | + | |transcript_name=NM_001136204 BC042141 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10584.1 | |tss_id=hg_10584.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9P258 |
}} | }} | ||
Revision as of 18:23, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17438536 |
|---|---|
| End of the center position in the TSS region: | 17438537 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001136204 BC042141 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | NM_001136204:0 BC042141:0 AB384219:10 ENST00000375433.3:-14 BC053908:-14 GQ901050:-14 LF383924:-16 MA619501:-16 BC142946:211 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_001136204 |
| Entrez ID: | 55920 |
| Nearest Unigene: | Hs.380857 |
| Nearest Refseq: | NM_018715 |
| Nearest Ensembl: | ENSG00000179051 |
| Gene Name: | regulator of chromosome condensation 2 |
| Gene Alias: | TD-60 |
| Gene Description: | regulator of chromosome condensation 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
