Difference between revisions of "TSS:Hg 105841.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000372281. | + | |all_trans=ENST00000372281.8:0 ENST00000372275.5:0 ENST00000372274.5:0 NM_025125:0 AK222536:0 AK023325:0 BC022252:0 KJ894792:0 CR457310:0 ENST00000372277.7:-10 ENST00000472622.5:-10 ENST00000613758.4:-10 NM_001270371:-10 NM_001270370:-10 NM_001270373:-10 NM_001270372:-10 AK309425:-214 AK300490:312 NM_001270369:322 NM_001270368:322 NM_001270367:322 ENST00000372273.7:335 AL832483:335 AK309980:347 |
|bA369J21.6= | |bA369J21.6= | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=13 |
|end=80078701 | |end=80078701 | ||
|end_of_center_position=80078679 | |end_of_center_position=80078679 | ||
|entrez_id=80195 | |entrez_id=80195 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=C10orf57 | + | |gene_alias=C10orf57{{!}}bA369J21.6 |
|gene_description=transmembrane protein 254 | |gene_description=transmembrane protein 254 | ||
|gene_id=80195 | |gene_id=80195 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_025125 | |nearest_refseq=NM_025125 | ||
|nearest_unigene=Hs.169982 | |nearest_unigene=Hs.169982 | ||
| − | |num_trans= | + | |num_trans=24 |
|species=human | |species=human | ||
|start=80078655 | |start=80078655 | ||
|start_of_center_position=80078678 | |start_of_center_position=80078678 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000372281. | + | |transcript_name=ENST00000372281.8 ENST00000372275.5 ENST00000372274.5 NM_025125 AK222536 AK023325 BC022252 KJ894792 CR457310 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105841.1 | |tss_id=hg_105841.1 | ||
Revision as of 18:23, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 80078678 |
|---|---|
| End of the center position in the TSS region: | 80078679 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000372281.8 ENST00000372275.5 ENST00000372274.5 NM_025125 AK222536 AK023325 BC022252 KJ894792 CR457310 |
|---|---|
| Distance: | 0 |
| Num_trans: | 24 |
| All_trans: | ENST00000372281.8:0 ENST00000372275.5:0 ENST00000372274.5:0 NM_025125:0 AK222536:0 AK023325:0 BC022252:0 KJ894792:0 CR457310:0 ENST00000372277.7:-10 ENST00000472622.5:-10 ENST00000613758.4:-10 NM_001270371:-10 NM_001270370:-10 NM_001270373:-10 NM_001270372:-10 AK309425:-214 AK300490:312 NM_001270369:322 NM_001270368:322 NM_001270367:322 ENST00000372273.7:335 AL832483:335 AK309980:347 |
TATA-Box annotation
| Distance to TSS: | 13 |
|---|---|
| Nearest PromoterID: | NM_025125 |
| Entrez ID: | 80195 |
| Nearest Unigene: | Hs.169982 |
| Nearest Refseq: | NM_025125 |
| Nearest Ensembl: | ENSG00000133678 |
| Gene Name: | transmembrane protein 254 |
| Gene Alias: | C10orf57|bA369J21.6 |
| Gene Description: | transmembrane protein 254 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
