Difference between revisions of "TSS:Hg 10587.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=LF357185:-101 MA592762:-101 ENST00000375436.9:-346 NM_018715:-346 AB040903:-354 AJ421269:-393 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| − | |distance=- | + | |distance=-101 |
| − | |distance_to_tss= | + | |distance_to_tss=355 |
|end=17439331 | |end=17439331 | ||
| + | |end_of_center_position=17439323 | ||
|entrez_id=55920 | |entrez_id=55920 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| Line 11: | Line 12: | ||
|gene_description=regulator of chromosome condensation 2 | |gene_description=regulator of chromosome condensation 2 | ||
|gene_id=55920 | |gene_id=55920 | ||
| − | |gene_name= | + | |gene_name=RCC2 |
|gene_source=HGNC:30297 | |gene_source=HGNC:30297 | ||
|gene_symbol=RCC2 | |gene_symbol=RCC2 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_018715 | |nearest_refseq=NM_018715 | ||
|nearest_unigene=Hs.380857 | |nearest_unigene=Hs.380857 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=17439313 | |start=17439313 | ||
| + | |start_of_center_position=17439322 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF357185 MA592762 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10587.1 | |tss_id=hg_10587.1 | ||
Latest revision as of 18:24, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 17439322 |
|---|---|
| End of the center position in the TSS region: | 17439323 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | LF357185 MA592762 |
|---|---|
| Distance: | -101 |
| Num_trans: | 6 |
| All_trans: | LF357185:-101 MA592762:-101 ENST00000375436.9:-346 NM_018715:-346 AB040903:-354 AJ421269:-393 |
TATA-Box annotation
| Distance to TSS: | 355 |
|---|---|
| Nearest PromoterID: | NM_018715 |
| Entrez ID: | 55920 |
| Nearest Unigene: | Hs.380857 |
| Nearest Refseq: | NM_018715 |
| Nearest Ensembl: | ENSG00000179051 |
| Gene Name: | RCC2 |
| Gene Alias: | TD-60 |
| Gene Description: | regulator of chromosome condensation 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
