Difference between revisions of "TSS:Hg 105877.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|TM4SF14= | |TM4SF14= | ||
| + | |all_trans=NM_001351271:-16 NM_001351272:-16 LF334058:-216 MA569635:-216 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=-16 |
| − | |distance_to_tss= | + | |distance_to_tss=10 |
|end=80468289 | |end=80468289 | ||
|end_of_center_position=80468273 | |end_of_center_position=80468273 | ||
|entrez_id=81619 | |entrez_id=81619 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=DC-TM4F2 | + | |gene_alias=DC-TM4F2{{!}}TM4SF14{{!}}tspan-14 |
|gene_description=tetraspanin 14 | |gene_description=tetraspanin 14 | ||
| − | |gene_name=TSPAN14 | + | |gene_id=81619 |
| + | |gene_name=tetraspanin 14 | ||
| + | |gene_source=HGNC:23303 | ||
| + | |gene_symbol=TSPAN14 | ||
| + | |gene_synonyms=DC-TM4F2 MGC11352 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23303 | ||
|nearest_ensembl=ENSG00000108219 | |nearest_ensembl=ENSG00000108219 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001351272 |
|nearest_refseq=NM_030927 | |nearest_refseq=NM_030927 | ||
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.308615 |
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=80468256 | |start=80468256 | ||
|start_of_center_position=80468272 | |start_of_center_position=80468272 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001351271 NM_001351272 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_105877.1 | |tss_id=hg_105877.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:24, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 80468272 |
|---|---|
| End of the center position in the TSS region: | 80468273 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001351271 NM_001351272 |
|---|---|
| Distance: | -16 |
| Num_trans: | 4 |
| All_trans: | NM_001351271:-16 NM_001351272:-16 LF334058:-216 MA569635:-216 |
TATA-Box annotation
| Distance to TSS: | 10 |
|---|---|
| Nearest PromoterID: | NM_001351272 |
| Entrez ID: | 81619 |
| Nearest Unigene: | Hs.308615 |
| Nearest Refseq: | NM_030927 |
| Nearest Ensembl: | ENSG00000108219 |
| Gene Name: | tetraspanin 14 |
| Gene Alias: | DC-TM4F2|TM4SF14|tspan-14 |
| Gene Description: | tetraspanin 14 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
