Difference between revisions of "TSS:Hg 105884.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK025157:152 | + | |all_trans=LF334036:-98 MA569613:-98 LF334035:103 MA569612:103 AK025157:152 LF334034:168 MA569611:168 LF334033:485 MA569610:485 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=-98 |
| − | |distance_to_tss= | + | |distance_to_tss=17230 |
|end=80518739 | |end=80518739 | ||
| − | |entrez_id= | + | |end_of_center_position=80518712 |
| + | |entrez_id=101929574 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description=uncharacterized | + | |gene_description=uncharacterized LOC101929574 |
|gene_id=81619 | |gene_id=81619 | ||
| − | |gene_name= | + | |gene_name=LOC101929574 |
|gene_source=HGNC:23303 | |gene_source=HGNC:23303 | ||
|gene_symbol=TSPAN14 | |gene_symbol=TSPAN14 | ||
| Line 17: | Line 18: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:23303 | |hgnc_mgi_id=HGNC:23303 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000226659 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_120661 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_120661 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.593663 |
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=80518684 | |start=80518684 | ||
| + | |start_of_center_position=80518711 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF334036 MA569613 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_105884.1 | |tss_id=hg_105884.1 | ||
Latest revision as of 18:24, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 80518711 |
|---|---|
| End of the center position in the TSS region: | 80518712 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF334036 MA569613 |
|---|---|
| Distance: | -98 |
| Num_trans: | 9 |
| All_trans: | LF334036:-98 MA569613:-98 LF334035:103 MA569612:103 AK025157:152 LF334034:168 MA569611:168 LF334033:485 MA569610:485 |
TATA-Box annotation
| Distance to TSS: | 17230 |
|---|---|
| Nearest PromoterID: | NR_120661 |
| Entrez ID: | 101929574 |
| Nearest Unigene: | Hs.593663 |
| Nearest Refseq: | NR_120661 |
| Nearest Ensembl: | ENSG00000226659 |
| Gene Name: | LOC101929574 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101929574 |
| Gene Type: | ncRNA |
| CpG%: | 0.035 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
