Difference between revisions of "TSS:Hg 105893.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=416568 |entrez_id=387694 |gc_percent=0.457711 |gene_alias=- |gene_description=SH2 domain containing 4B |gene_name=SH2D4B |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance_to_tss= | + | |distance=NA |
| − | |entrez_id= | + | |distance_to_tss=307590 |
| + | |end=80957390 | ||
| + | |end_of_center_position=80957388 | ||
| + | |entrez_id=105378386 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=long intergenic non-protein coding RNA 2655 |
| − | |gene_name= | + | |gene_name=LINC02655 |
| − | |gene_type= | + | |gene_type=ncRNA |
| − | |nearest_ensembl= | + | |nearest_ensembl= |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_155749 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_155749 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.531456 |
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=80957384 | ||
| + | |start_of_center_position=80957387 | ||
| + | |strand=+ | ||
| + | |tata_box=-35(GATTTTATAAGC,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_105893.1 | |tss_id=hg_105893.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:24, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 80957387 |
|---|---|
| End of the center position in the TSS region: | 80957388 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 307590 |
|---|---|
| Nearest PromoterID: | NR_155749 |
| Entrez ID: | 105378386 |
| Nearest Unigene: | Hs.531456 |
| Nearest Refseq: | NR_155749 |
| Nearest Ensembl: | |
| Gene Name: | LINC02655 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 2655 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(GATTTTATAAGC,-,0.00) |
