Difference between revisions of "TSS:Hg 105900.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000372141.7:443 NM_001010848:443 NR_163251:443 NM_001370084:443 NM_001370083:443 NM_001370082:443 NM_001370081:443 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| − | |distance= | + | |distance=443 |
| − | |distance_to_tss=- | + | |distance_to_tss=-453 |
|end=81874751 | |end=81874751 | ||
|end_of_center_position=81874741 | |end_of_center_position=81874741 | ||
|entrez_id=10718 | |entrez_id=10718 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| − | |gene_alias=HRG3 | + | |gene_alias=HRG3{{!}}pro-NRG3 |
|gene_description=neuregulin 3 | |gene_description=neuregulin 3 | ||
| − | |gene_name=NRG3 | + | |gene_id=10718 |
| + | |gene_name=neuregulin 3 | ||
| + | |gene_source=HGNC:7999 | ||
| + | |gene_symbol=NRG3 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7999 | ||
|nearest_ensembl=ENSG00000185737 | |nearest_ensembl=ENSG00000185737 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001370083 |
|nearest_refseq=NM_001010848 | |nearest_refseq=NM_001010848 | ||
|nearest_unigene=Hs.125119 | |nearest_unigene=Hs.125119 | ||
| − | |num_trans= | + | |num_trans=7 |
|pro-NRG3= | |pro-NRG3= | ||
|species=human | |species=human | ||
| Line 22: | Line 28: | ||
|start_of_center_position=81874740 | |start_of_center_position=81874740 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000372141.7 NM_001010848 NR_163251 NM_001370084 NM_001370083 NM_001370082 NM_001370081 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_105900.1 | |tss_id=hg_105900.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=P56975 | ||
}} | }} | ||
Revision as of 18:25, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 81874740 |
|---|---|
| End of the center position in the TSS region: | 81874741 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000372141.7 NM_001010848 NR_163251 NM_001370084 NM_001370083 NM_001370082 NM_001370081 |
|---|---|
| Distance: | 443 |
| Num_trans: | 7 |
| All_trans: | ENST00000372141.7:443 NM_001010848:443 NR_163251:443 NM_001370084:443 NM_001370083:443 NM_001370082:443 NM_001370081:443 |
TATA-Box annotation
| Distance to TSS: | -453 |
|---|---|
| Nearest PromoterID: | NM_001370083 |
| Entrez ID: | 10718 |
| Nearest Unigene: | Hs.125119 |
| Nearest Refseq: | NM_001010848 |
| Nearest Ensembl: | ENSG00000185737 |
| Gene Name: | neuregulin 3 |
| Gene Alias: | HRG3|pro-NRG3 |
| Gene Description: | neuregulin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
