Difference between revisions of "TSS:Hg 105901.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000372141.7:410 NM_001010848:410 NR_163251:410 NM_001370084:410 NM_001370083:410 NM_001370082:410 NM_001370081:410 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| − | |distance= | + | |distance=410 |
| − | |distance_to_tss=- | + | |distance_to_tss=-425 |
|end=81874784 | |end=81874784 | ||
|end_of_center_position=81874769 | |end_of_center_position=81874769 | ||
|entrez_id=10718 | |entrez_id=10718 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=HRG3 | + | |gene_alias=HRG3{{!}}pro-NRG3 |
|gene_description=neuregulin 3 | |gene_description=neuregulin 3 | ||
| − | |gene_name=NRG3 | + | |gene_id=10718 |
| + | |gene_name=neuregulin 3 | ||
| + | |gene_source=HGNC:7999 | ||
| + | |gene_symbol=NRG3 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7999 | ||
|nearest_ensembl=ENSG00000185737 | |nearest_ensembl=ENSG00000185737 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001370083 |
|nearest_refseq=NM_001010848 | |nearest_refseq=NM_001010848 | ||
|nearest_unigene=Hs.125119 | |nearest_unigene=Hs.125119 | ||
| − | |num_trans= | + | |num_trans=7 |
|pro-NRG3= | |pro-NRG3= | ||
|species=human | |species=human | ||
| Line 22: | Line 28: | ||
|start_of_center_position=81874768 | |start_of_center_position=81874768 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000372141.7 NM_001010848 NR_163251 NM_001370084 NM_001370083 NM_001370082 NM_001370081 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_105901.1 | |tss_id=hg_105901.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=P56975 | ||
}} | }} | ||
Revision as of 18:25, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 81874768 |
|---|---|
| End of the center position in the TSS region: | 81874769 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000372141.7 NM_001010848 NR_163251 NM_001370084 NM_001370083 NM_001370082 NM_001370081 |
|---|---|
| Distance: | 410 |
| Num_trans: | 7 |
| All_trans: | ENST00000372141.7:410 NM_001010848:410 NR_163251:410 NM_001370084:410 NM_001370083:410 NM_001370082:410 NM_001370081:410 |
TATA-Box annotation
| Distance to TSS: | -425 |
|---|---|
| Nearest PromoterID: | NM_001370083 |
| Entrez ID: | 10718 |
| Nearest Unigene: | Hs.125119 |
| Nearest Refseq: | NM_001010848 |
| Nearest Ensembl: | ENSG00000185737 |
| Gene Name: | neuregulin 3 |
| Gene Alias: | HRG3|pro-NRG3 |
| Gene Description: | neuregulin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
