Difference between revisions of "TSS:Hg 105911.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=169395 |entrez_id=101929590 |gc_percent=0.338308 |gene_alias=C10orf100|Em:AC010157.1 |gene_description=NRG3 antisense RNA 1 |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Em:AC010157.1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=NA | ||
|distance_to_tss=169395 | |distance_to_tss=169395 | ||
| + | |end=82063527 | ||
| + | |end_of_center_position=82063525 | ||
|entrez_id=101929590 | |entrez_id=101929590 | ||
|gc_percent=0.338308 | |gc_percent=0.338308 | ||
| − | |gene_alias=C10orf100 | + | |gene_alias=C10orf100{{!}}Em:AC010157.1 |
|gene_description=NRG3 antisense RNA 1 | |gene_description=NRG3 antisense RNA 1 | ||
|gene_name=NRG3-AS1 | |gene_name=NRG3-AS1 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NR_120666 | |nearest_refseq=NR_120666 | ||
|nearest_unigene=Hs.733268 | |nearest_unigene=Hs.733268 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=82063522 | ||
| + | |start_of_center_position=82063524 | ||
| + | |strand=+ | ||
| + | |tata_box=-35(TTTTTTAGAGGC,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_105911.1 | |tss_id=hg_105911.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:25, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 82063524 |
|---|---|
| End of the center position in the TSS region: | 82063525 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 169395 |
|---|---|
| Nearest PromoterID: | NR_120666 |
| Entrez ID: | 101929590 |
| Nearest Unigene: | Hs.733268 |
| Nearest Refseq: | NR_120666 |
| Nearest Ensembl: | ENSG00000225738 |
| Gene Name: | NRG3-AS1 |
| Gene Alias: | C10orf100|Em:AC010157.1 |
| Gene Description: | NRG3 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.338308 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(TTTTTTAGAGGC,+,0.00) |
