Difference between revisions of "TSS:Hg 105926.1"
From referenceTSS
| Line 5: | Line 5: | ||
|PTD010= | |PTD010= | ||
|TMBIM5= | |TMBIM5= | ||
| − | |all_trans= | + | |all_trans=ENST00000372134.6:0 NM_014394:0 AF131820:0 AF078863:0 AL136713:2 AF161400:3 AK299937:-8 AK130094:9 LF213794:13 MA449371:13 LF210013:-14 MA445590:-14 BC022872:31 AK225318:35 AF060923:38 AK298332:39 AK098770:39 BC010354:42 AK130097:44 AK297960:45 AK292864:46 AY358824:49 LF334029:377 MA569606:377 LF334028:475 MA569605:475 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-5 |
|end=84139517 | |end=84139517 | ||
|end_of_center_position=84139505 | |end_of_center_position=84139505 | ||
|entrez_id=27069 | |entrez_id=27069 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=DERP2 | + | |gene_alias=DERP2{{!}}HSPC282{{!}}MICS1{{!}}My021{{!}}PTD010{{!}}TMBIM5 |
|gene_description=growth hormone inducible transmembrane protein | |gene_description=growth hormone inducible transmembrane protein | ||
|gene_id=27069 | |gene_id=27069 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_014394 | |nearest_refseq=NM_014394 | ||
|nearest_unigene=Hs.352656 | |nearest_unigene=Hs.352656 | ||
| − | |num_trans= | + | |num_trans=26 |
|species=human | |species=human | ||
|start=84139491 | |start=84139491 | ||
|start_of_center_position=84139504 | |start_of_center_position=84139504 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000372134.6 NM_014394 AF131820 AF078863 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105926.1 | |tss_id=hg_105926.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q9Y6G2 | + | |uniprot_id=Q9H3K2 Q9Y6G2 |
}} | }} | ||
Revision as of 18:25, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 84139504 |
|---|---|
| End of the center position in the TSS region: | 84139505 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000372134.6 NM_014394 AF131820 AF078863 |
|---|---|
| Distance: | 0 |
| Num_trans: | 26 |
| All_trans: | ENST00000372134.6:0 NM_014394:0 AF131820:0 AF078863:0 AL136713:2 AF161400:3 AK299937:-8 AK130094:9 LF213794:13 MA449371:13 LF210013:-14 MA445590:-14 BC022872:31 AK225318:35 AF060923:38 AK298332:39 AK098770:39 BC010354:42 AK130097:44 AK297960:45 AK292864:46 AY358824:49 LF334029:377 MA569606:377 LF334028:475 MA569605:475 |
TATA-Box annotation
| Distance to TSS: | -5 |
|---|---|
| Nearest PromoterID: | NM_014394 |
| Entrez ID: | 27069 |
| Nearest Unigene: | Hs.352656 |
| Nearest Refseq: | NM_014394 |
| Nearest Ensembl: | ENSG00000165678 |
| Gene Name: | growth hormone inducible transmembrane protein |
| Gene Alias: | DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5 |
| Gene Description: | growth hormone inducible transmembrane protein |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
