Difference between revisions of "TSS:Hg 105938.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=11288 | ||
| + | |end=84214260 | ||
| + | |end_of_center_position=84214256 | ||
|entrez_id=340745 | |entrez_id=340745 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
|gene_alias=LRRC22 | |gene_alias=LRRC22 | ||
| − | |gene_description= | + | |gene_description=leucine rich repeat, Ig-like and transmembrane domains 2 |
|gene_name=LRIT2 | |gene_name=LRIT2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000204033 | |nearest_ensembl=ENSG00000204033 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001017924 |
|nearest_refseq=NM_001017924 | |nearest_refseq=NM_001017924 | ||
|nearest_unigene=Hs.450425 | |nearest_unigene=Hs.450425 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=84214251 | ||
| + | |start_of_center_position=84214255 | ||
| + | |strand=+ | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_105938.1 | |tss_id=hg_105938.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:25, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 84214255 |
|---|---|
| End of the center position in the TSS region: | 84214256 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 11288 |
|---|---|
| Nearest PromoterID: | NM_001017924 |
| Entrez ID: | 340745 |
| Nearest Unigene: | Hs.450425 |
| Nearest Refseq: | NM_001017924 |
| Nearest Ensembl: | ENSG00000204033 |
| Gene Name: | LRIT2 |
| Gene Alias: | LRRC22 |
| Gene Description: | leucine rich repeat, Ig-like and transmembrane domains 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
