Difference between revisions of "TSS:Hg 105950.1"
From referenceTSS
| Line 5: | Line 5: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=12780 | |distance_to_tss=12780 | ||
|end=84341371 | |end=84341371 | ||
| Line 11: | Line 11: | ||
|entrez_id=54462 | |entrez_id=54462 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=FAM190B | + | |gene_alias=FAM190B{{!}}Gcap14{{!}}KIAA1128{{!}}bA486O22.1 |
|gene_description=coiled-coil serine rich protein 2 | |gene_description=coiled-coil serine rich protein 2 | ||
|gene_name=CCSER2 | |gene_name=CCSER2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000107771 | |nearest_ensembl=ENSG00000107771 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_018999 |
|nearest_refseq=NM_018999 | |nearest_refseq=NM_018999 | ||
|nearest_unigene=Hs.461988 | |nearest_unigene=Hs.461988 | ||
| Line 24: | Line 24: | ||
|start_of_center_position=84341368 | |start_of_center_position=84341368 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-7(TTTTTTAGAGGC,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 18:26, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 84341368 |
|---|---|
| End of the center position in the TSS region: | 84341369 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 12780 |
|---|---|
| Nearest PromoterID: | NM_018999 |
| Entrez ID: | 54462 |
| Nearest Unigene: | Hs.461988 |
| Nearest Refseq: | NM_018999 |
| Nearest Ensembl: | ENSG00000107771 |
| Gene Name: | CCSER2 |
| Gene Alias: | FAM190B|Gcap14|KIAA1128|bA486O22.1 |
| Gene Description: | coiled-coil serine rich protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -7(TTTTTTAGAGGC,+,0.00) |
