Difference between revisions of "TSS:Hg 10599.1"
From referenceTSS
| Line 2: | Line 2: | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=12799 | |distance_to_tss=12799 | ||
|end=17631119 | |end=17631119 | ||
| Line 21: | Line 21: | ||
|start_of_center_position=17631111 | |start_of_center_position=17631111 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-34(GGACATAAAAGG,-,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 18:27, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17631111 |
|---|---|
| End of the center position in the TSS region: | 17631112 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 12799 |
|---|---|
| Nearest PromoterID: | NM_001319838 |
| Entrez ID: | 55160 |
| Nearest Unigene: | Hs.443460 |
| Nearest Refseq: | NM_018125 |
| Nearest Ensembl: | ENSG00000074964 |
| Gene Name: | ARHGEF10L |
| Gene Alias: | GrinchGEF |
| Gene Description: | Rho guanine nucleotide exchange factor 10 like |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(GGACATAAAAGG,-,0.00) |
