Difference between revisions of "TSS:Hg 105997.1"
From referenceTSS
| Line 4: | Line 4: | ||
|CD292= | |CD292= | ||
|SKR5= | |SKR5= | ||
| − | |all_trans= | + | |all_trans=ENST00000638429.1:57 ENST00000372037.8:75 NM_004329:75 LF385535:95 MA621112:95 BC028383:106 LF210008:215 MA445585:215 AK291764:226 Z22535:334 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| − | |distance= | + | |distance=57 |
|distance_to_tss=-104 | |distance_to_tss=-104 | ||
|end=86756544 | |end=86756544 | ||
| Line 13: | Line 13: | ||
|entrez_id=657 | |entrez_id=657 | ||
|gc_percent=0.820896 | |gc_percent=0.820896 | ||
| − | |gene_alias=10q23del | + | |gene_alias=10q23del{{!}}ACVRLK3{{!}}ALK3{{!}}CD292{{!}}SKR5 |
|gene_description=bone morphogenetic protein receptor type 1A | |gene_description=bone morphogenetic protein receptor type 1A | ||
|gene_id=657 | |gene_id=657 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_004329 | |nearest_refseq=NM_004329 | ||
|nearest_unigene=Hs.524477 | |nearest_unigene=Hs.524477 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=86756525 | |start=86756525 | ||
|start_of_center_position=86756534 | |start_of_center_position=86756534 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000638429.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105997.1 | |tss_id=hg_105997.1 | ||
Revision as of 18:27, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 86756534 |
|---|---|
| End of the center position in the TSS region: | 86756535 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000638429.1 |
|---|---|
| Distance: | 57 |
| Num_trans: | 10 |
| All_trans: | ENST00000638429.1:57 ENST00000372037.8:75 NM_004329:75 LF385535:95 MA621112:95 BC028383:106 LF210008:215 MA445585:215 AK291764:226 Z22535:334 |
TATA-Box annotation
| Distance to TSS: | -104 |
|---|---|
| Nearest PromoterID: | NM_004329 |
| Entrez ID: | 657 |
| Nearest Unigene: | Hs.524477 |
| Nearest Refseq: | NM_004329 |
| Nearest Ensembl: | ENSG00000107779 |
| Gene Name: | bone morphogenetic protein receptor type 1A |
| Gene Alias: | 10q23del|ACVRLK3|ALK3|CD292|SKR5 |
| Gene Description: | bone morphogenetic protein receptor type 1A |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.820896 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
