Difference between revisions of "TSS:Hg 105999.1"
From referenceTSS
| Line 4: | Line 4: | ||
|CD292= | |CD292= | ||
|SKR5= | |SKR5= | ||
| − | |all_trans= | + | |all_trans=BC028383:0 LF385535:-1 MA621112:-1 ENST00000372037.8:-21 NM_004329:-21 ENST00000638429.1:-39 LF210008:90 MA445585:90 AK291764:101 Z22535:209 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| Line 13: | Line 13: | ||
|entrez_id=657 | |entrez_id=657 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias=10q23del | + | |gene_alias=10q23del{{!}}ACVRLK3{{!}}ALK3{{!}}CD292{{!}}SKR5 |
|gene_description=bone morphogenetic protein receptor type 1A | |gene_description=bone morphogenetic protein receptor type 1A | ||
|gene_id=657 | |gene_id=657 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_004329 | |nearest_refseq=NM_004329 | ||
|nearest_unigene=Hs.524477 | |nearest_unigene=Hs.524477 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=86756639 | |start=86756639 | ||
|start_of_center_position=86756654 | |start_of_center_position=86756654 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=BC028383 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105999.1 | |tss_id=hg_105999.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 18:27, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 86756654 |
|---|---|
| End of the center position in the TSS region: | 86756655 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC028383 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | BC028383:0 LF385535:-1 MA621112:-1 ENST00000372037.8:-21 NM_004329:-21 ENST00000638429.1:-39 LF210008:90 MA445585:90 AK291764:101 Z22535:209 |
TATA-Box annotation
| Distance to TSS: | 15 |
|---|---|
| Nearest PromoterID: | NM_004329 |
| Entrez ID: | 657 |
| Nearest Unigene: | Hs.524477 |
| Nearest Refseq: | NM_004329 |
| Nearest Ensembl: | ENSG00000107779 |
| Gene Name: | bone morphogenetic protein receptor type 1A |
| Gene Alias: | 10q23del|ACVRLK3|ALK3|CD292|SKR5 |
| Gene Description: | bone morphogenetic protein receptor type 1A |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
