Difference between revisions of "TSS:Hg 106004.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|SR= | |SR= | ||
| + | |all_trans=NM_001330120:0 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=5 |
|end=86955776 | |end=86955776 | ||
|end_of_center_position=86955765 | |end_of_center_position=86955765 | ||
|entrez_id=6623 | |entrez_id=6623 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=BCSG1 | + | |gene_alias=BCSG1{{!}}SR |
|gene_description=synuclein gamma | |gene_description=synuclein gamma | ||
| − | |gene_name=SNCG | + | |gene_id=6623 |
| + | |gene_name=synuclein gamma | ||
| + | |gene_source=HGNC:11141 | ||
| + | |gene_symbol=SNCG | ||
| + | |gene_synonyms=BCSG1 SR persyn | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11141 | ||
|nearest_ensembl=ENSG00000173267 | |nearest_ensembl=ENSG00000173267 | ||
|nearest_promoter_id=NM_001330120 | |nearest_promoter_id=NM_001330120 | ||
|nearest_refseq=NM_003087 | |nearest_refseq=NM_003087 | ||
|nearest_unigene=Hs.349470 | |nearest_unigene=Hs.349470 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=86955752 | |start=86955752 | ||
|start_of_center_position=86955764 | |start_of_center_position=86955764 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001330120 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_106004.1 | |tss_id=hg_106004.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=O76070 | ||
}} | }} | ||
Revision as of 18:27, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 86955764 |
|---|---|
| End of the center position in the TSS region: | 86955765 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001330120 |
|---|---|
| Distance: | 0 |
| Num_trans: | 1 |
| All_trans: | NM_001330120:0 |
TATA-Box annotation
| Distance to TSS: | 5 |
|---|---|
| Nearest PromoterID: | NM_001330120 |
| Entrez ID: | 6623 |
| Nearest Unigene: | Hs.349470 |
| Nearest Refseq: | NM_003087 |
| Nearest Ensembl: | ENSG00000173267 |
| Gene Name: | synuclein gamma |
| Gene Alias: | BCSG1|SR |
| Gene Description: | synuclein gamma |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
