Difference between revisions of "TSS:Hg 106009.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|SR= | |SR= | ||
| − | |all_trans=ENST00000483064.1:29 | + | |all_trans=ENST00000483064.1:29 LF333957:-192 MA569534:-192 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=29 | |distance=29 | ||
| − | |distance_to_tss= | + | |distance_to_tss=743 |
|end=86959346 | |end=86959346 | ||
|end_of_center_position=86959342 | |end_of_center_position=86959342 | ||
|entrez_id=6623 | |entrez_id=6623 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=BCSG1 | + | |gene_alias=BCSG1{{!}}SR |
|gene_description=synuclein gamma | |gene_description=synuclein gamma | ||
|gene_id=6623 | |gene_id=6623 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_003087 | |nearest_refseq=NM_003087 | ||
|nearest_unigene=Hs.349470 | |nearest_unigene=Hs.349470 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=86959337 | |start=86959337 | ||
|start_of_center_position=86959341 | |start_of_center_position=86959341 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000483064 | + | |transcript_name=ENST00000483064.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106009.1 | |tss_id=hg_106009.1 | ||
Revision as of 18:27, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 86959341 |
|---|---|
| End of the center position in the TSS region: | 86959342 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000483064.1 |
|---|---|
| Distance: | 29 |
| Num_trans: | 3 |
| All_trans: | ENST00000483064.1:29 LF333957:-192 MA569534:-192 |
TATA-Box annotation
| Distance to TSS: | 743 |
|---|---|
| Nearest PromoterID: | NM_003087 |
| Entrez ID: | 6623 |
| Nearest Unigene: | Hs.349470 |
| Nearest Refseq: | NM_003087 |
| Nearest Ensembl: | ENSG00000173267 |
| Gene Name: | synuclein gamma |
| Gene Alias: | BCSG1|SR |
| Gene Description: | synuclein gamma |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
