Difference between revisions of "TSS:Hg 106023.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 4: | Line 4: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss=- | + | |distance_to_tss=-72476 |
|end=87587403 | |end=87587403 | ||
| + | |end_of_center_position=87587403 | ||
|entrez_id=9060 | |entrez_id=9060 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| − | |gene_alias=ATPSK2 | + | |gene_alias=ATPSK2{{!}}BCYM4{{!}}SK2 |
|gene_description=3'-phosphoadenosine 5'-phosphosulfate synthase 2 | |gene_description=3'-phosphoadenosine 5'-phosphosulfate synthase 2 | ||
|gene_name=PAPSS2 | |gene_name=PAPSS2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000198682 | |nearest_ensembl=ENSG00000198682 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001015880 |
|nearest_refseq=NM_004670 | |nearest_refseq=NM_004670 | ||
|nearest_unigene=Hs.524491 | |nearest_unigene=Hs.524491 | ||
| Line 20: | Line 21: | ||
|species=human | |species=human | ||
|start=87587401 | |start=87587401 | ||
| + | |start_of_center_position=87587402 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=85(TCCCATAAGAGG,-,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 18:28, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 87587402 |
|---|---|
| End of the center position in the TSS region: | 87587403 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -72476 |
|---|---|
| Nearest PromoterID: | NM_001015880 |
| Entrez ID: | 9060 |
| Nearest Unigene: | Hs.524491 |
| Nearest Refseq: | NM_004670 |
| Nearest Ensembl: | ENSG00000198682 |
| Gene Name: | PAPSS2 |
| Gene Alias: | ATPSK2|BCYM4|SK2 |
| Gene Description: | 3'-phosphoadenosine 5'-phosphosulfate synthase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 85(TCCCATAAGAGG,-,0.00) |
