Difference between revisions of "TSS:Hg 106024.1"
From referenceTSS
| Line 6: | Line 6: | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=26 | |distance=26 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-17298 |
|end=87642581 | |end=87642581 | ||
|end_of_center_position=87642581 | |end_of_center_position=87642581 | ||
|entrez_id=9060 | |entrez_id=9060 | ||
|gc_percent=0.41791 | |gc_percent=0.41791 | ||
| − | |gene_alias=ATPSK2 | + | |gene_alias=ATPSK2{{!}}BCYM4{{!}}SK2 |
|gene_description=3'-phosphoadenosine 5'-phosphosulfate synthase 2 | |gene_description=3'-phosphoadenosine 5'-phosphosulfate synthase 2 | ||
| − | |gene_name= | + | |gene_id= |
| + | |gene_name=ribosomal protein S26 pseudogene 38 | ||
| + | |gene_source=HGNC:36406 | ||
| + | |gene_symbol=RPS26P38 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:36406 | ||
|nearest_ensembl=ENSG00000198682 | |nearest_ensembl=ENSG00000198682 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001015880 |
|nearest_refseq=NM_004670 | |nearest_refseq=NM_004670 | ||
|nearest_unigene=Hs.524491 | |nearest_unigene=Hs.524491 | ||
| Line 28: | Line 33: | ||
|tss_id=hg_106024.1 | |tss_id=hg_106024.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:28, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 87642580 |
|---|---|
| End of the center position in the TSS region: | 87642581 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000414476.1 |
|---|---|
| Distance: | 26 |
| Num_trans: | 1 |
| All_trans: | ENST00000414476.1:26 |
TATA-Box annotation
| Distance to TSS: | -17298 |
|---|---|
| Nearest PromoterID: | NM_001015880 |
| Entrez ID: | 9060 |
| Nearest Unigene: | Hs.524491 |
| Nearest Refseq: | NM_004670 |
| Nearest Ensembl: | ENSG00000198682 |
| Gene Name: | ribosomal protein S26 pseudogene 38 |
| Gene Alias: | ATPSK2|BCYM4|SK2 |
| Gene Description: | 3'-phosphoadenosine 5'-phosphosulfate synthase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
