Difference between revisions of "TSS:Hg 10604.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=-57647 |entrez_id=81569 |gc_percent=0.542289 |gene_alias=CT57 |gene_description=actin like 8 |gene_name=ACTL8 |gene_type=protein...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr1 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance_to_tss=- | + | |distance=NA |
| + | |distance_to_tss=-57667 | ||
| + | |end=17697668 | ||
| + | |end_of_center_position=17697667 | ||
|entrez_id=81569 | |entrez_id=81569 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_030812 | |nearest_refseq=NM_030812 | ||
|nearest_unigene=Hs.2149 | |nearest_unigene=Hs.2149 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=17697664 | ||
| + | |start_of_center_position=17697666 | ||
| + | |strand=- | ||
| + | |tata_box=45(GCTTTTAAAAAG,+,0.00),45(GCTTTTAAAAAG,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_10604.1 | |tss_id=hg_10604.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:28, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17697666 |
|---|---|
| End of the center position in the TSS region: | 17697667 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -57667 |
|---|---|
| Nearest PromoterID: | NM_030812 |
| Entrez ID: | 81569 |
| Nearest Unigene: | Hs.2149 |
| Nearest Refseq: | NM_030812 |
| Nearest Ensembl: | ENSG00000117148 |
| Gene Name: | ACTL8 |
| Gene Alias: | CT57 |
| Gene Description: | actin like 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 45(GCTTTTAAAAAG,+,0.00),45(GCTTTTAAAAAG,-,0.00) |
