Difference between revisions of "TSS:Hg 106162.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=-22190 |entrez_id=643529 |gc_percent=0.422886 |gene_alias=- |gene_description=long intergenic non-protein coding RNA 865 |gene_name...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance=NA | ||
|distance_to_tss=-22190 | |distance_to_tss=-22190 | ||
| + | |end=89807309 | ||
| + | |end_of_center_position=89807303 | ||
|entrez_id=643529 | |entrez_id=643529 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_038382 | |nearest_refseq=NR_038382 | ||
|nearest_unigene=Hs.618956 | |nearest_unigene=Hs.618956 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=89807296 | ||
| + | |start_of_center_position=89807302 | ||
| + | |strand=+ | ||
| + | |tata_box=-77(TCTTTTATAGAA,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_106162.1 | |tss_id=hg_106162.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:31, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 89807302 |
|---|---|
| End of the center position in the TSS region: | 89807303 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -22190 |
|---|---|
| Nearest PromoterID: | NR_038382 |
| Entrez ID: | 643529 |
| Nearest Unigene: | Hs.618956 |
| Nearest Refseq: | NR_038382 |
| Nearest Ensembl: | ENSG00000232229 |
| Gene Name: | LINC00865 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 865 |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -77(TCTTTTATAGAA,+,0.00) |
