Difference between revisions of "TSS:Hg 106244.1"
From referenceTSS
| Line 4: | Line 4: | ||
|MCLMR= | |MCLMR= | ||
|TRIP5= | |TRIP5= | ||
| − | |all_trans=NM_004523: | + | |all_trans=ENST00000676621.1:49 ENST00000677720.1:49 ENST00000260731.5:49 NM_004523:49 BC050421:66 BC050667:80 AK314258:84 BC136474:187 BC126211:187 U37426:205 X85137:290 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| − | |distance= | + | |distance=49 |
| − | |distance_to_tss= | + | |distance_to_tss=-58 |
|end=92593081 | |end=92593081 | ||
|end_of_center_position=92593072 | |end_of_center_position=92593072 | ||
|entrez_id=3832 | |entrez_id=3832 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=EG5 | + | |gene_alias=EG5{{!}}HKSP{{!}}KNSL1{{!}}MCLMR{{!}}TRIP5 |
|gene_description=kinesin family member 11 | |gene_description=kinesin family member 11 | ||
|gene_id=3832 | |gene_id=3832 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_004523 | |nearest_refseq=NM_004523 | ||
|nearest_unigene=Hs.8878 | |nearest_unigene=Hs.8878 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=92593062 | |start=92593062 | ||
|start_of_center_position=92593071 | |start_of_center_position=92593071 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_004523 | + | |transcript_name=ENST00000676621.1 ENST00000677720.1 ENST00000260731.5 NM_004523 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106244.1 | |tss_id=hg_106244.1 | ||
Revision as of 18:33, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 92593071 |
|---|---|
| End of the center position in the TSS region: | 92593072 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000676621.1 ENST00000677720.1 ENST00000260731.5 NM_004523 |
|---|---|
| Distance: | 49 |
| Num_trans: | 11 |
| All_trans: | ENST00000676621.1:49 ENST00000677720.1:49 ENST00000260731.5:49 NM_004523:49 BC050421:66 BC050667:80 AK314258:84 BC136474:187 BC126211:187 U37426:205 X85137:290 |
TATA-Box annotation
| Distance to TSS: | -58 |
|---|---|
| Nearest PromoterID: | NM_004523 |
| Entrez ID: | 3832 |
| Nearest Unigene: | Hs.8878 |
| Nearest Refseq: | NM_004523 |
| Nearest Ensembl: | ENSG00000138160 |
| Gene Name: | kinesin family member 11 |
| Gene Alias: | EG5|HKSP|KNSL1|MCLMR|TRIP5 |
| Gene Description: | kinesin family member 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
