Difference between revisions of "TSS:Hg 106315.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=51704 |entrez_id=100128054 |gc_percent=0.452736 |gene_alias=- |gene_description=PLCE1 antisense RNA 1 |gene_name=PLCE1-AS1 |gen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=NA | ||
|distance_to_tss=51704 | |distance_to_tss=51704 | ||
| + | |end=94235369 | ||
| + | |end_of_center_position=94235367 | ||
|entrez_id=100128054 | |entrez_id=100128054 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_033969 | |nearest_refseq=NR_033969 | ||
|nearest_unigene=Hs.677562 | |nearest_unigene=Hs.677562 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=94235363 | ||
| + | |start_of_center_position=94235366 | ||
| + | |strand=+ | ||
| + | |tata_box=61(GCTTAAAGAGCT,+,0.00),68(GAGCTTAAAAAC,-,0.00),70(GCTTAAAAACCA,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_106315.1 | |tss_id=hg_106315.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:35, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 94235366 |
|---|---|
| End of the center position in the TSS region: | 94235367 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 51704 |
|---|---|
| Nearest PromoterID: | NR_033969 |
| Entrez ID: | 100128054 |
| Nearest Unigene: | Hs.677562 |
| Nearest Refseq: | NR_033969 |
| Nearest Ensembl: | ENSG00000268894 |
| Gene Name: | PLCE1-AS1 |
| Gene Alias: | - |
| Gene Description: | PLCE1 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 61(GCTTAAAGAGCT,+,0.00),68(GAGCTTAAAAAC,-,0.00),70(GCTTAAAAACCA,+,0.00) |
