Difference between revisions of "TSS:Hg 106358.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.14 |distance_to_tss=-175 |entrez_id=10580 |gc_percent=0.776119 |gene_alias=CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1 |gene_description=sorbin and SH3 domai...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |FLAF2= | ||
| + | |R85FL= | ||
| + | |SH3D5= | ||
| + | |SH3P12= | ||
| + | |SORB1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| − | |distance_to_tss=- | + | |distance=NA |
| + | |distance_to_tss=-224 | ||
| + | |end=95561612 | ||
| + | |end_of_center_position=95561596 | ||
|entrez_id=10580 | |entrez_id=10580 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
| − | |gene_alias=CAP | + | |gene_alias=CAP{{!}}FLAF2{{!}}R85FL{{!}}SH3D5{{!}}SH3P12{{!}}SORB1 |
|gene_description=sorbin and SH3 domain containing 1 | |gene_description=sorbin and SH3 domain containing 1 | ||
|gene_name=SORBS1 | |gene_name=SORBS1 | ||
| Line 12: | Line 21: | ||
|nearest_refseq=NM_006434 | |nearest_refseq=NM_006434 | ||
|nearest_unigene=Hs.38621 | |nearest_unigene=Hs.38621 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=95561578 | ||
| + | |start_of_center_position=95561595 | ||
| + | |strand=+ | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106358.1 | |tss_id=hg_106358.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:36, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 95561595 |
|---|---|
| End of the center position in the TSS region: | 95561596 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -224 |
|---|---|
| Nearest PromoterID: | NM_001290294 |
| Entrez ID: | 10580 |
| Nearest Unigene: | Hs.38621 |
| Nearest Refseq: | NM_006434 |
| Nearest Ensembl: | ENSG00000095637 |
| Gene Name: | SORBS1 |
| Gene Alias: | CAP|FLAF2|R85FL|SH3D5|SH3P12|SORB1 |
| Gene Description: | sorbin and SH3 domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
