Difference between revisions of "TSS:Hg 106594.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=20460 |entrez_id=7479 |gc_percent=0.457711 |gene_alias=- |gene_description=Wnt family member 8B |gene_name=WNT8B |gene_type=pro...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=20506 | ||
| + | |end=100483532 | ||
| + | |end_of_center_position=100483516 | ||
|entrez_id=7479 | |entrez_id=7479 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_003393 | |nearest_refseq=NM_003393 | ||
|nearest_unigene=Hs.421281 | |nearest_unigene=Hs.421281 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=100483498 | ||
| + | |start_of_center_position=100483515 | ||
| + | |strand=+ | ||
| + | |tata_box=78(ACCCTTTAAAGG,-,0.00),79(CCCTTTAAAGGT,+,0.00),79(CCCTTTAAAGGT,-,0.00),80(CCTTTAAAGGTA,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_106594.1 | |tss_id=hg_106594.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:41, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 100483515 |
|---|---|
| End of the center position in the TSS region: | 100483516 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 20506 |
|---|---|
| Nearest PromoterID: | NM_003393 |
| Entrez ID: | 7479 |
| Nearest Unigene: | Hs.421281 |
| Nearest Refseq: | NM_003393 |
| Nearest Ensembl: | ENSG00000075290 |
| Gene Name: | WNT8B |
| Gene Alias: | - |
| Gene Description: | Wnt family member 8B |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 78(ACCCTTTAAAGG,-,0.00),79(CCCTTTAAAGGT,+,0.00),79(CCCTTTAAAGGT,-,0.00),80(CCTTTAAAGGTA,+,0.00) |
