Difference between revisions of "TSS:Hg 106682.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.05 |distance_to_tss=571 |entrez_id=8861 |gc_percent=0.616915 |gene_alias=CLIM-2|CLIM2|LDB-1|NLI |gene_description=LIM domain binding 1 |gene_name=LD...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CLIM2= | ||
| + | |LDB-1= | ||
| + | |NLI= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=466 | ||
| + | |end=102119917 | ||
| + | |end_of_center_position=102119902 | ||
|entrez_id=8861 | |entrez_id=8861 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=CLIM-2 | + | |gene_alias=CLIM-2{{!}}CLIM2{{!}}LDB-1{{!}}NLI |
|gene_description=LIM domain binding 1 | |gene_description=LIM domain binding 1 | ||
|gene_name=LDB1 | |gene_name=LDB1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000198728 | |nearest_ensembl=ENSG00000198728 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001321612 |
|nearest_refseq=NM_003893 | |nearest_refseq=NM_003893 | ||
|nearest_unigene=Hs.454418 | |nearest_unigene=Hs.454418 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=102119886 | ||
| + | |start_of_center_position=102119901 | ||
| + | |strand=+ | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106682.1 | |tss_id=hg_106682.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:43, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 102119901 |
|---|---|
| End of the center position in the TSS region: | 102119902 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 466 |
|---|---|
| Nearest PromoterID: | NM_001321612 |
| Entrez ID: | 8861 |
| Nearest Unigene: | Hs.454418 |
| Nearest Refseq: | NM_003893 |
| Nearest Ensembl: | ENSG00000198728 |
| Gene Name: | LDB1 |
| Gene Alias: | CLIM-2|CLIM2|LDB-1|NLI |
| Gene Description: | LIM domain binding 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
